Click here to switch to the map view.

The map label for this gene is flgC [H]

Identifier: 57238273

GI number: 57238273

Start: 567900

End: 568394

Strand: Reverse

Name: flgC [H]

Synonym: CJE0631

Alternate gene names: 57238273

Gene position: 568394-567900 (Counterclockwise)

Preceding gene: 57238272

Following gene: 57238274

Centisome position: 31.97

GC content: 33.94

Gene sequence:

>495_bases
ATGGCATACTTAAGTGATTTTGATATTAGTGGTTATGGTTTAAGTGCTCAACGTTTTAGAATGAATGTTATTAGCTCTAA
TATAGCTAATGCAAACACTACAAGAACAGCTGAAGGTGGGCCTTATAGAAGACGCGAAGTGATCTTTAAAGCAACAGATT
TTGATAAGCTTTTAAATGAGCGAATTAACAAAGATAATAATTTTTTAAAATATGAAAATCCTTTAAATGATCCAAGTTCG
CCAGAAGAAGCTAAACCTGCTATTCAAAGTGTTGTAGTGGATAAAGTGGTCAGAGATGACAAAGATTTTCGTATGAAGTA
TGATCCAAGCCATCCTGATGCAAATGCTGAAGGTTATGTAGCGTATCCAAATGTAAACCCTGTTATTGAAATGGCAGATT
TGATTGAAGCTACAAGAGCTTATCAAGCCAATGTAAGTGCTTTTACAAGTGCAAAAACTATAGCTCAAAGTGCGATTGAT
TTATTAAGAGGATAA

Upstream 100 bases:

>100_bases
TACAGTTATGATAACAGCTCTTGATGGAGTTTTAAGAAGACAAAGCAATATCTTTAGTTCTATACTTGATGCAAGCTCTA
AATTAAGTTAAAGGTAAATT

Downstream 100 bases:

>100_bases
TAAAAAATGAACAATATTAATGATTTAAGATTAAATAATAATATTTCAAATACCAACAAAAGTCAAAATTCCACAGGAAT
TGGTGATGAATTTGCCAAGA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLNERINKDNNFLKYENPLNDPSS
PEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAID
LLRG

Sequences:

>Translated_164_residues
MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLNERINKDNNFLKYENPLNDPSS
PEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAID
LLRG
>Mature_163_residues
AYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLNERINKDNNFLKYENPLNDPSSP
EEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDL
LRG

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=161, Percent_Identity=31.6770186335404, Blast_Score=88, Evalue=3e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 18331; Mature: 18199

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLNE
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHH
RINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYV
HCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEE
AYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLRG
ECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRREVIFKATDFDKLLNE
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHH
RINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFRMKYDPSHPDANAEGYV
HCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEE
AYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLRG
ECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]