Click here to switch to the map view.

The map label for this gene is oorD

Identifier: 57238265

GI number: 57238265

Start: 577678

End: 577989

Strand: Direct

Name: oorD

Synonym: CJE0639

Alternate gene names: NA

Gene position: 577678-577989 (Clockwise)

Preceding gene: 57238266

Following gene: 57238264

Centisome position: 32.49

GC content: 40.71

Gene sequence:

>312_bases
ATGAGTATGACAGCTCCAAAAGATACCCCTGTTTGGGTAGATGAGCATAGATGTAAAGCATGCAATATTTGTGTTAGCTA
TTGCCCCGCTGGGGTTTTAGCTATGCGCGATGATGTGCATGCGGTTTTAGGACAAATGATAGAGGTGGTACACCCTGAAT
CCTGTATAGGCTGTACCGAGTGTGAGACACATTGCCCTGATTTTGCTATTATGGTGGCAAAAAGAGATGAATTTAAATTT
GCCAAACTTACTGCTGAGGCTAAAGATAGAGCTGTAGCCGTAAAAAATAACAAATACAAAAAATTAGCATAG

Upstream 100 bases:

>100_bases
AAAAAAGAAGCTTTAAAAAGCTATGGAATTCATGTGGTGGATTCTCCGGCTTTGATTGGTGAAGAAATTCAAAAAATATT
AGGTTAATAAAGGAAAAAAC

Downstream 100 bases:

>100_bases
GAAAAATAATGAGAGAAGTTATAGCAACAGGTAATGTTTTAATCGCCAAAGCTGCGATTGATTGTGGATGTAAATTTTTT
GGAGGTTATCCTATTACTCC

Product: 2-oxoglutarate-acceptor oxidoreductase subunit OorD

Products: succinyl-CoA; CO2; reduced ferredoxin

Alternate protein names: 2-Oxoglutarate Ferredoxin Oxidoreductase Subunit Delta; 2-Oxoglutarate Ferredoxin Oxidoreductase Delta Subunit; OorD Subunit Of 2-OxoglutarateAcceptor Oxidoreductase; OORD Subunit Of 2-OxoglutarateAcceptor Oxidoreductase; 2-OxoglutarateAcceptor Oxidoreductase Subunit OorD; 2-OxoglutarateAcceptor Oxidoreductase OorD Subunit

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSMTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLGQMIEVVHPESCIGCTECETHCPDFAIMVAKRDEFKF
AKLTAEAKDRAVAVKNNKYKKLA

Sequences:

>Translated_103_residues
MSMTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLGQMIEVVHPESCIGCTECETHCPDFAIMVAKRDEFKF
AKLTAEAKDRAVAVKNNKYKKLA
>Mature_102_residues
SMTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLGQMIEVVHPESCIGCTECETHCPDFAIMVAKRDEFKFA
KLTAEAKDRAVAVKNNKYKKLA

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.7.3

Molecular weight: Translated: 11431; Mature: 11300

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
12.6 %Cys+Met (Translated Protein)
7.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
11.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLGQMIEVVHPESCIGCTE
CCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCC
CETHCPDFAIMVAKRDEFKFAKLTAEAKDRAVAVKNNKYKKLA
CCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECCCCEECCC
>Mature Secondary Structure 
SMTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLGQMIEVVHPESCIGCTE
CCCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCC
CETHCPDFAIMVAKRDEFKFAKLTAEAKDRAVAVKNNKYKKLA
CCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-oxoglutarate; CoA; oxidized ferredoxin

Specific reaction: 2-oxoglutarate + CoA + oxidized ferredoxin = succinyl-CoA + CO2 + reduced ferredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA