| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238247
Identifier: 57238247
GI number: 57238247
Start: 593394
End: 594347
Strand: Direct
Name: 57238247
Synonym: CJE0657
Alternate gene names: NA
Gene position: 593394-594347 (Clockwise)
Preceding gene: 57238248
Following gene: 57238246
Centisome position: 33.38
GC content: 31.45
Gene sequence:
>954_bases ATGATAAGTCTTGATTTGCTTTATTATATTGTAGGAATTTTATTTTTAGTTTTTGGAATTTTAAGTTTTTCTAATCAAGC TAAAGATATAAAATCAAGAATAAGCGGCGGGGTATTCTGGATAAGTTATAGTTTTACTTTTTTACTAGCAGGAGTTTTGC CTCATTTTGTGATGGGTTGTATAGTGATTTTACTAGCACTTATAGCAGGATTTAATTTATTAAAACCAGCAAAGATTGAA GTTAGCAAAGAAGAAAAAGAATACGAGATAAAACATGCAAATATTTATAAAAATAAACTTTTTATTCCTGCTTTAATAGT TCCTTTGATTACACTTATTGGGACTTTTTTATTTCCCTATTTGAGTTTTTTTGAAAATAAAAATGCTACATTGATGGCTT TGATTATAGGTATAATTATTTCTTCAGTAGTTGCTTGTTTTATGTTTAAGGCTTCTCCTAAAAGAGCTGTTAAAGATGCA GCACATACTATGGATCACATTAGTTGGGCAGCGCTTTTACCGCAAATTTTGGCTACACTTGGGGTAGTTTTTGTTTCTAC AGGAATGGGCGATCAAGTATCTAAACTTTTATCTAGTTATATTAGTTTAGATAATGCTTTTATTGCAGTAGCTGTGTATT GTATCGCTATGGCGCTTTTTACTATAGTAATGGGCAATGCTTTTGCAGCTTTTCCTGTGATTACTGCTGCTATTGCTTTG CCGATTTTAATCATACAAATGCATGCAAATCCTGCTATTATAGGAGCGATTGGAATGCTTAGTGGATTTTGCGGAACTTT AATGACGCCTATGGCTGCAAATTTTAATATAGTTCCTGCGGCACTTTTAAATTTGGATGATAAAAATGGCGTAATTAAAG CCCAGTTTATGTCAGGACTTGTTTTGCTTGTGGCTAATATCTTTTTAATGTATTTTTTAGCTTTTAGATTTTAA
Upstream 100 bases:
>100_bases GTTTGGGCTATACCAACTGGAATTTTGGCTTTAATTATCCATTGTTCTAGACTTTATTTATTTGATAAAAGATTAGAAAA AACTTATAAAGGGTTGAGTG
Downstream 100 bases:
>100_bases GGAGAAACAATGGAAAAATTTATAAAACAATTTAGCTTTATTGCACTAGAAAATATTTTTAGAGAATTGCCAAATAAAAT TACACATTCTTTTAATGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYSFTFLLAGVLPHFVMGCIVILLALIAGFNLLKPAKIE VSKEEKEYEIKHANIYKNKLFIPALIVPLITLIGTFLFPYLSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDA AHTMDHISWAALLPQILATLGVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMALFTIVMGNAFAAFPVITAAIAL PILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFNIVPAALLNLDDKNGVIKAQFMSGLVLLVANIFLMYFLAFRF
Sequences:
>Translated_317_residues MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYSFTFLLAGVLPHFVMGCIVILLALIAGFNLLKPAKIE VSKEEKEYEIKHANIYKNKLFIPALIVPLITLIGTFLFPYLSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDA AHTMDHISWAALLPQILATLGVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMALFTIVMGNAFAAFPVITAAIAL PILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFNIVPAALLNLDDKNGVIKAQFMSGLVLLVANIFLMYFLAFRF >Mature_317_residues MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYSFTFLLAGVLPHFVMGCIVILLALIAGFNLLKPAKIE VSKEEKEYEIKHANIYKNKLFIPALIVPLITLIGTFLFPYLSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDA AHTMDHISWAALLPQILATLGVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMALFTIVMGNAFAAFPVITAAIAL PILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFNIVPAALLNLDDKNGVIKAQFMSGLVLLVANIFLMYFLAFRF
Specific function: Unknown
COG id: COG3817
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34471; Mature: 34471
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYSFTFLLAGVLPHFVMGC CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH IVILLALIAGFNLLKPAKIEVSKEEKEYEIKHANIYKNKLFIPALIVPLITLIGTFLFPY HHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDAAHTMDHISWAALLPQILATL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMALFTIVMGNAFAAFPVITAAIAL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH PILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFNIVPAALLNLDDKNGVIKAQFMSGL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEHHHHHHHH VLLVANIFLMYFLAFRF HHHHHHHHHHHHHHHCC >Mature Secondary Structure MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYSFTFLLAGVLPHFVMGC CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH IVILLALIAGFNLLKPAKIEVSKEEKEYEIKHANIYKNKLFIPALIVPLITLIGTFLFPY HHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDAAHTMDHISWAALLPQILATL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMALFTIVMGNAFAAFPVITAAIAL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH PILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFNIVPAALLNLDDKNGVIKAQFMSGL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEHHHHHHHH VLLVANIFLMYFLAFRF HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA