| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238244
Identifier: 57238244
GI number: 57238244
Start: 596783
End: 597580
Strand: Direct
Name: 57238244
Synonym: CJE0660
Alternate gene names: NA
Gene position: 596783-597580 (Clockwise)
Preceding gene: 57238245
Following gene: 57238241
Centisome position: 33.57
GC content: 25.81
Gene sequence:
>798_bases ATGAAGATTGATACTCACGCACATATATTTTTGAAAAAGTTAAATACGGTTGCAAATGCAAGATATAAGCCTGATTATGA CGCTAGTTTTAAAGATTATAAAGCAAATTTAGATCATTATGATTTTAATAAAGGGGTTTTAGTTCAGCCAAGTTTTTTAG GTATTGATAATGAATTTTTGCTTCAGAGTATAGAAAAAGATGAAAATATAAAAGCTATAGTTGTGGTTGATGAAAATATT AAATTTGATGAGCTTAAAAAACTAAAAGAAAGAAAAGCTTGTGGAGTTAGATTAAATTTAATTGGCAAAGAATTACCAAA TTTTAAAAGTATGGTTTGGACTCAATTTTTTGAAAATTTAAGTAAGCTTAAAATGCAAATAGAAATTCAAAGAGATTTAG ATAATAATCTTGTTGATATTGTTGAAAATTTAATTCCTTATGGTTGTAATATTGTTATCGATCATTTAGCAAGAGCTAAT GCAAACTTAACAAATTTAGAGGATTTAATTTGCTTAAAAAACTCTAGAATATTTTTTAAAATTAGCGGTTTTTATAGAGC AAAAATAGATTATGCTAATAATGAACAAGCTGTAAAATTTGCAAAGAAAATATATGAAATTTTAAAAGAACATTTTCCAC TTAGCAATTTTGTTTTTGGAAGCGATTGGCCACATACAAATTTTGAATCAAATGTTAATTTTTCATCGGCTCTAGTAGCT TTTAATGAAGTTGTCGTATCTAAAAAAGAACAAGAGCAAATTTTAGGGGATAATGCTTGTGCTTTATTTGGCTTTTAA
Upstream 100 bases:
>100_bases AAATTATTTAAAGATTTACTTATTAAAGCTGTGCCTATAGGATTTATAGCGGCGATTTTAGCTACTATTATAATGAGTTT TATTTTATAAGGATAATTTA
Downstream 100 bases:
>100_bases GCTTTTTGTTTTATCCTAAAGATGTATTTTGCAATGCGTTCAAAATGCACTCTTAGATAAGGTTTGTAAATCACAAAACC ACCTAAAAGCCCTAAAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase; Amidohydrolase Family Protein; Hydrolase Amidohydrolase 2 Motif; Dicarboxylic Acid Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase Protein; Exported Protein
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MKIDTHAHIFLKKLNTVANARYKPDYDASFKDYKANLDHYDFNKGVLVQPSFLGIDNEFLLQSIEKDENIKAIVVVDENI KFDELKKLKERKACGVRLNLIGKELPNFKSMVWTQFFENLSKLKMQIEIQRDLDNNLVDIVENLIPYGCNIVIDHLARAN ANLTNLEDLICLKNSRIFFKISGFYRAKIDYANNEQAVKFAKKIYEILKEHFPLSNFVFGSDWPHTNFESNVNFSSALVA FNEVVVSKKEQEQILGDNACALFGF
Sequences:
>Translated_265_residues MKIDTHAHIFLKKLNTVANARYKPDYDASFKDYKANLDHYDFNKGVLVQPSFLGIDNEFLLQSIEKDENIKAIVVVDENI KFDELKKLKERKACGVRLNLIGKELPNFKSMVWTQFFENLSKLKMQIEIQRDLDNNLVDIVENLIPYGCNIVIDHLARAN ANLTNLEDLICLKNSRIFFKISGFYRAKIDYANNEQAVKFAKKIYEILKEHFPLSNFVFGSDWPHTNFESNVNFSSALVA FNEVVVSKKEQEQILGDNACALFGF >Mature_265_residues MKIDTHAHIFLKKLNTVANARYKPDYDASFKDYKANLDHYDFNKGVLVQPSFLGIDNEFLLQSIEKDENIKAIVVVDENI KFDELKKLKERKACGVRLNLIGKELPNFKSMVWTQFFENLSKLKMQIEIQRDLDNNLVDIVENLIPYGCNIVIDHLARAN ANLTNLEDLICLKNSRIFFKISGFYRAKIDYANNEQAVKFAKKIYEILKEHFPLSNFVFGSDWPHTNFESNVNFSSALVA FNEVVVSKKEQEQILGDNACALFGF
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30586; Mature: 30586
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDTHAHIFLKKLNTVANARYKPDYDASFKDYKANLDHYDFNKGVLVQPSFLGIDNEFL CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCHHCCCCHHHH LQSIEKDENIKAIVVVDENIKFDELKKLKERKACGVRLNLIGKELPNFKSMVWTQFFENL HHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCEEEEEHHCCCCCHHHHHHHHHHHHH SKLKMQIEIQRDLDNNLVDIVENLIPYGCNIVIDHLARANANLTNLEDLICLKNSRIFFK HHHEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHEEEECCEEEEE ISGFYRAKIDYANNEQAVKFAKKIYEILKEHFPLSNFVFGSDWPHTNFESNVNFSSALVA ECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH FNEVVVSKKEQEQILGDNACALFGF HHHHHHCCHHHHHHHCCCCEEECCC >Mature Secondary Structure MKIDTHAHIFLKKLNTVANARYKPDYDASFKDYKANLDHYDFNKGVLVQPSFLGIDNEFL CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCHHCCCCHHHH LQSIEKDENIKAIVVVDENIKFDELKKLKERKACGVRLNLIGKELPNFKSMVWTQFFENL HHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCEEEEEHHCCCCCHHHHHHHHHHHHH SKLKMQIEIQRDLDNNLVDIVENLIPYGCNIVIDHLARANANLTNLEDLICLKNSRIFFK HHHEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHEEEECCEEEEE ISGFYRAKIDYANNEQAVKFAKKIYEILKEHFPLSNFVFGSDWPHTNFESNVNFSSALVA ECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH FNEVVVSKKEQEQILGDNACALFGF HHHHHHCCHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA