| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238200
Identifier: 57238200
GI number: 57238200
Start: 638657
End: 639538
Strand: Direct
Name: 57238200
Synonym: CJE0707
Alternate gene names: NA
Gene position: 638657-639538 (Clockwise)
Preceding gene: 57238204
Following gene: 57238199
Centisome position: 35.92
GC content: 32.31
Gene sequence:
>882_bases ATGCAAGAAAATAATTCTCCAAAAGCGCAAGCGGTTGTTAAAAAGAATGAAATTTATGTTTCTGTTAAAAGAAAGAAAAG TACAATAGAATATGAAAAAGATTTAAAGAATTTGCAAATTGAGCTTTTGAAATTTCAAAATCATGTTAAAGCCAAGGGTT TAAAGGTTCTTATGCTTATAGAAGGGCGTGATGCGGCTGGAAAAGGTGGGGCGATTAAACGTTTGATTGAGCATTTAAAT CCGCGTGGTTGCCGCGTTGTGGCTCTTGAAAAACCTAGTGATGTGGAAAAAACACAGTGGTATTTTCAGCGTTATATAGC ACATTTGCCCTCAGCCGGTGAGATTGTGATTTTTGACAGATCTTGGTATAATCGTGCAGGAGTAGAACCGGTTATGGGTT TTTGTACACCGCAACAACATAAAGATTTTTTAAGAGAAGTGCCTTTGTTTGAAAATATGATTTCAAATAGTGATATTATT TTTTTTAAATTTTATTTTTCAGTATCAAAAGACGAGCAAAAAAAACGTTTTGAAAAACGCCGAAGCGATCCACTTAAACA ATATAAATTATCTCCTGTGGATCAAAAATCGCAAGAATTATGGGATAAATATACTTTAGCTAAATACTCTATGCTTTTAG CATCTAATACTCCAACTTGTCCTTGGACTATTATTTCTTCTGATGATAAGAAAAAAGCAAGATTAAATTTATTGCGTTTT ATACTTTCTAAGGTAGAATATCCAAATAAAAAAACTGGAGATTTTTCCAAAATTGATGCAAAATTAGTGCGTAGTGGAGA AGAAGAAATACGAAAAATGGAGGCGAATTTGGAAAAACTTGACAGTAAAAAAGCAGATGAGAAAATAAAAGATTTAGATT AA
Upstream 100 bases:
>100_bases ACGCATAAATTTCCTAAAAACTTATTTTTTCCTTTATTTTTAACTTCAATTATAATTTATTATGGTAAATTTACTTTAAA TACTTTATAAAGGTTTGAAA
Downstream 100 bases:
>100_bases GGAAAAGAATGCAAAAGCTGGTTGAAAATTTAGCACTAAAGTACTATGATAAAGTAGTTGATTTAAGACATCAAATTCAT ATGCATCCTGAGCTTGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MQENNSPKAQAVVKKNEIYVSVKRKKSTIEYEKDLKNLQIELLKFQNHVKAKGLKVLMLIEGRDAAGKGGAIKRLIEHLN PRGCRVVALEKPSDVEKTQWYFQRYIAHLPSAGEIVIFDRSWYNRAGVEPVMGFCTPQQHKDFLREVPLFENMISNSDII FFKFYFSVSKDEQKKRFEKRRSDPLKQYKLSPVDQKSQELWDKYTLAKYSMLLASNTPTCPWTIISSDDKKKARLNLLRF ILSKVEYPNKKTGDFSKIDAKLVRSGEEEIRKMEANLEKLDSKKADEKIKDLD
Sequences:
>Translated_293_residues MQENNSPKAQAVVKKNEIYVSVKRKKSTIEYEKDLKNLQIELLKFQNHVKAKGLKVLMLIEGRDAAGKGGAIKRLIEHLN PRGCRVVALEKPSDVEKTQWYFQRYIAHLPSAGEIVIFDRSWYNRAGVEPVMGFCTPQQHKDFLREVPLFENMISNSDII FFKFYFSVSKDEQKKRFEKRRSDPLKQYKLSPVDQKSQELWDKYTLAKYSMLLASNTPTCPWTIISSDDKKKARLNLLRF ILSKVEYPNKKTGDFSKIDAKLVRSGEEEIRKMEANLEKLDSKKADEKIKDLD >Mature_293_residues MQENNSPKAQAVVKKNEIYVSVKRKKSTIEYEKDLKNLQIELLKFQNHVKAKGLKVLMLIEGRDAAGKGGAIKRLIEHLN PRGCRVVALEKPSDVEKTQWYFQRYIAHLPSAGEIVIFDRSWYNRAGVEPVMGFCTPQQHKDFLREVPLFENMISNSDII FFKFYFSVSKDEQKKRFEKRRSDPLKQYKLSPVDQKSQELWDKYTLAKYSMLLASNTPTCPWTIISSDDKKKARLNLLRF ILSKVEYPNKKTGDFSKIDAKLVRSGEEEIRKMEANLEKLDSKKADEKIKDLD
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 34115; Mature: 34115
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQENNSPKAQAVVKKNEIYVSVKRKKSTIEYEKDLKNLQIELLKFQNHVKAKGLKVLMLI CCCCCCCHHHHEEEECEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE EGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQWYFQRYIAHLPSAGEIVIFDR ECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC SWYNRAGVEPVMGFCTPQQHKDFLREVPLFENMISNSDIIFFKFYFSVSKDEQKKRFEKR CCCCCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHH RSDPLKQYKLSPVDQKSQELWDKYTLAKYSMLLASNTPTCPWTIISSDDKKKARLNLLRF CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH ILSKVEYPNKKTGDFSKIDAKLVRSGEEEIRKMEANLEKLDSKKADEKIKDLD HHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQENNSPKAQAVVKKNEIYVSVKRKKSTIEYEKDLKNLQIELLKFQNHVKAKGLKVLMLI CCCCCCCHHHHEEEECEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE EGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQWYFQRYIAHLPSAGEIVIFDR ECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC SWYNRAGVEPVMGFCTPQQHKDFLREVPLFENMISNSDIIFFKFYFSVSKDEQKKRFEKR CCCCCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHH RSDPLKQYKLSPVDQKSQELWDKYTLAKYSMLLASNTPTCPWTIISSDDKKKARLNLLRF CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHH ILSKVEYPNKKTGDFSKIDAKLVRSGEEEIRKMEANLEKLDSKKADEKIKDLD HHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]