Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

Click here to switch to the map view.

The map label for this gene is 57237927

Identifier: 57237927

GI number: 57237927

Start: 1103489

End: 1104340

Strand: Reverse

Name: 57237927

Synonym: CJE1185

Alternate gene names: NA

Gene position: 1104340-1103489 (Counterclockwise)

Preceding gene: 57237928

Following gene: 57237926

Centisome position: 62.12

GC content: 28.64

Gene sequence:

>852_bases
ATGAAAAAATATGTTTTAAGTTTAGCGCTTCTTGGAAGTTTGCTTGGTGCAAGTGAATTAAAATATCAAGAATTTGATGG
TTTTAAAAGCCCTGAAAGTATTTTTGTAGATAAAAACTATGTTTATGTATCTAATGTAGGAGAAAAACTTGAACCTTTGG
CGAAAGATAATGATGGATTTATTTCTAAGCTTGATAAAAATGGCAAAGTGCTAGAATATAAATTTTTAACCCATCTTAAT
GCACCAAAAGGCATGATGGAGATTGGAAAAACTCTTTATGTGGTAGATATCGATGTTTTACGCGGTTTTGATCTTAAAAC
TAAAAAAGAAATTTTTAATTTACCTATTAAAGGTGCAATCTTTTTAAATGACATAGAAAAATTAGACGACAATACGCTTT
TGGTTAGCGATACTGGCACAGGGCTTATTTTAAAGGTTGATTTAAAAACTAAGCAATATGATGAATTATTAAAACTTGAT
TTAGCAAAATTTGGCGGTCCAAATGGGTTATATCTAGATAGAAAAAAACATAAGCTTTTTATAACTGGTTATCATCCTGA
TGGTGTAAGTGGCGGTGTTGTAATGGCTTATGATTTAAATACAAAAGAACTCAGTATAATTAAAAATGAAAAAGAATCTT
ATGATGGAATAGTTCCTTATAAAGATGGTTTATTGGTAAGTTCTTGGGGAAATAATCTAAATGGATATATTTATAATTTA
GATAATGTTAAATCTGTAAAACTTGAACTTCCTTTGATGAAAGGTCCTGCAGATATATTTATTGAAGGTAATATTTTATG
GATTCCTAAGATGGCAGAAGGTAAAATATTCAAAGTAGAACTTAACAAATAA

Upstream 100 bases:

>100_bases
AAAAAACAAAAAACTTGTATTTTTTATCAAAAAACTAGCACATTTTTTTTATCTAAATAAATATAATTCAATGAAAATAT
TTTTAAATAAAGGAGAAAAT

Downstream 100 bases:

>100_bases
GGCTTTTATGGCTTCTTTTAAAAAGATATTTTGGATTAATGTTATTATTGTTATTATTGTAGCTTTTAATCTTAGAGCCC
CAATTACTGCAGTGGGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKKYVLSLALLGSLLGASELKYQEFDGFKSPESIFVDKNYVYVSNVGEKLEPLAKDNDGFISKLDKNGKVLEYKFLTHLN
APKGMMEIGKTLYVVDIDVLRGFDLKTKKEIFNLPIKGAIFLNDIEKLDDNTLLVSDTGTGLILKVDLKTKQYDELLKLD
LAKFGGPNGLYLDRKKHKLFITGYHPDGVSGGVVMAYDLNTKELSIIKNEKESYDGIVPYKDGLLVSSWGNNLNGYIYNL
DNVKSVKLELPLMKGPADIFIEGNILWIPKMAEGKIFKVELNK

Sequences:

>Translated_283_residues
MKKYVLSLALLGSLLGASELKYQEFDGFKSPESIFVDKNYVYVSNVGEKLEPLAKDNDGFISKLDKNGKVLEYKFLTHLN
APKGMMEIGKTLYVVDIDVLRGFDLKTKKEIFNLPIKGAIFLNDIEKLDDNTLLVSDTGTGLILKVDLKTKQYDELLKLD
LAKFGGPNGLYLDRKKHKLFITGYHPDGVSGGVVMAYDLNTKELSIIKNEKESYDGIVPYKDGLLVSSWGNNLNGYIYNL
DNVKSVKLELPLMKGPADIFIEGNILWIPKMAEGKIFKVELNK
>Mature_283_residues
MKKYVLSLALLGSLLGASELKYQEFDGFKSPESIFVDKNYVYVSNVGEKLEPLAKDNDGFISKLDKNGKVLEYKFLTHLN
APKGMMEIGKTLYVVDIDVLRGFDLKTKKEIFNLPIKGAIFLNDIEKLDDNTLLVSDTGTGLILKVDLKTKQYDELLKLD
LAKFGGPNGLYLDRKKHKLFITGYHPDGVSGGVVMAYDLNTKELSIIKNEKESYDGIVPYKDGLLVSSWGNNLNGYIYNL
DNVKSVKLELPLMKGPADIFIEGNILWIPKMAEGKIFKVELNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31741; Mature: 31741

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYVLSLALLGSLLGASELKYQEFDGFKSPESIFVDKNYVYVSNVGEKLEPLAKDNDGF
CCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEEEECCEEEEECCCCHHCHHCCCCCCH
ISKLDKNGKVLEYKFLTHLNAPKGMMEIGKTLYVVDIDVLRGFDLKTKKEIFNLPIKGAI
HEEECCCCCEEEEEEEEECCCCCCHHHHCCEEEEEEEEHHCCCCCCCHHHHHCCCCCEEE
FLNDIEKLDDNTLLVSDTGTGLILKVDLKTKQYDELLKLDLAKFGGPNGLYLDRKKHKLF
EEECHHHCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEE
ITGYHPDGVSGGVVMAYDLNTKELSIIKNEKESYDGIVPYKDGLLVSSWGNNLNGYIYNL
EEEECCCCCCCCEEEEEECCCCEEEEEECCCHHCCCCCCCCCCEEEEECCCCCCEEEEEC
DNVKSVKLELPLMKGPADIFIEGNILWIPKMAEGKIFKVELNK
CCCEEEEEEEEEECCCCEEEEECCEEEEEECCCCEEEEEEECC
>Mature Secondary Structure
MKKYVLSLALLGSLLGASELKYQEFDGFKSPESIFVDKNYVYVSNVGEKLEPLAKDNDGF
CCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEEEECCEEEEECCCCHHCHHCCCCCCH
ISKLDKNGKVLEYKFLTHLNAPKGMMEIGKTLYVVDIDVLRGFDLKTKKEIFNLPIKGAI
HEEECCCCCEEEEEEEEECCCCCCHHHHCCEEEEEEEEHHCCCCCCCHHHHHCCCCCEEE
FLNDIEKLDDNTLLVSDTGTGLILKVDLKTKQYDELLKLDLAKFGGPNGLYLDRKKHKLF
EEECHHHCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEE
ITGYHPDGVSGGVVMAYDLNTKELSIIKNEKESYDGIVPYKDGLLVSSWGNNLNGYIYNL
EEEECCCCCCCCEEEEEECCCCEEEEEECCCHHCCCCCCCCCCEEEEECCCCCCEEEEEC
DNVKSVKLELPLMKGPADIFIEGNILWIPKMAEGKIFKVELNK
CCCEEEEEEEEEECCCCEEEEECCEEEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA