Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

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The map label for this gene is 57237859

Identifier: 57237859

GI number: 57237859

Start: 1035796

End: 1037226

Strand: Reverse

Name: 57237859

Synonym: CJE1114

Alternate gene names: NA

Gene position: 1037226-1035796 (Counterclockwise)

Preceding gene: 57237860

Following gene: 57237858

Centisome position: 58.34

GC content: 26.14

Gene sequence:

>1431_bases
ATGATAGGTAAAGACTTTTTATATTCTATTCATAAAGATAAAAAAAGTATTTATTTGTTTTGTGAAAATAAAAGCATAAT
TGATTGTCAAAGTATTTATGATGAACTTTATAAATTAGAAGCAACGACAGATTTTACTTTTGAAGAACTCCAAAACTATC
AAGCTTATATCTTCCTAAACTCCACTCTCCTTACAGGCTCAAATGAACTTCCTAACAATCCTTTTTACTTTGGAGAATTA
GATCAAGATAATACTATAAAACAAGATACACCTAGTTATTATTTTTCTCCTAAAGATGAAAGCAGTGGTTTAGGAAGACT
TAGTATCTTTTATAAAAATGATGAACTTTGTTTGCTTAATTATTCTATATTAGAAAATTCTTTAAATATCAAATTAGAAT
GTTTAAGCAAACAAAGCTTAGAGTATAAAGACTTAATTTCAAACACTTTAAAAGAACAAAAAACCACACAAGTAGATAAA
AAACAAGCTATAGCTAAACTTCATGCTCTTTTAGAAAATCAAAACCTAGAATGTATCCATGGAGGTAAAGTCATACTTAA
ATCAAACAAAGGAAAAACTTTTAAAGATGATGGCGTGCCTATAATGCTAGAAAGTGATTTATTAAACTCTAGTATAGTAG
CTTGTCCTAATACTATAGCAGGTGTAAGTGTTCCTTGTACTAAAGTTGTTAATGTAAAAGGATCCTTATCTCAAAAGAAA
GTCAATAATGAATATGTAATCTTACAAGAACTCATCTCAGCTTGTAAAACAGATAAAGGCTTTGCTTTAAAAGTAAGCTT
TACTCCTACTAAGTTTAAATTTGATCACAGCTTTGATCCTAAAGAGGGCTTAGGAGAACAAAGTAAAAATCAAATAGAGT
TAAAAGAGCCTATAATAAGACTTCATTATAAAAGTGATAGATTTCAAAAAGATAATTTACCTATCTATAATCTTTTAATC
AATAATGAAAAAAAAGAACAAAATAAGGCTTTAAATGAATTTAATATAGATTTAAAAGATTTAAAAGATATAGAGGATAT
AAATATTCTTAATCAATTCAAACAAGACTTTAGTAAAGATTATGAATTTAAAGAACTAAATCTTAGCTTTGATACTAATT
TAATCAAACTTTATTTTATTATCCCAAAAAACATTGCTAAAGTTTATAAAAGTGCTTATAAGGAATTTAAAAATAAAGAT
TTAGGAGCAGGGTATTTTACACAGCTACATGAGTATGATAAAATCATCAAAAATGCTTTAGAAGATAATAAAGAATTAAA
CGAATATCATTTTAGTTTTTTAACTCCTGCTAAAATGCAAAATTTAAAACTTCAAATCGCACAAGGACTAGATGAAATCT
TAGAAGATGAAGATAGAAAACAAGAGCTTTATGTTTGTAAATTTGTGGTGGTAAATGGGGTTAAAATATGA

Upstream 100 bases:

>100_bases
GATCAAATTTGGGATGAGCAATATTTAGGTGGAGTTTGTAAAATATCACAAGCTTTGTATTTTAATGGAAAAGCTAAAAT
AGGTATTATTTAGGAAAATT

Downstream 100 bases:

>100_bases
AAATAAAAAATTTTACTTTAATTGCATCAAATCATAATTTAGAAATCGAGTTAAAAAATCTTACCAAAAATGCTAATAAA
ATTATTTTTATATGCAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MIGKDFLYSIHKDKKSIYLFCENKSIIDCQSIYDELYKLEATTDFTFEELQNYQAYIFLNSTLLTGSNELPNNPFYFGEL
DQDNTIKQDTPSYYFSPKDESSGLGRLSIFYKNDELCLLNYSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDK
KQAIAKLHALLENQNLECIHGGKVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKK
VNNEYVILQELISACKTDKGFALKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIRLHYKSDRFQKDNLPIYNLLI
NNEKKEQNKALNEFNIDLKDLKDIEDINILNQFKQDFSKDYEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKD
LGAGYFTQLHEYDKIIKNALEDNKELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVKI

Sequences:

>Translated_476_residues
MIGKDFLYSIHKDKKSIYLFCENKSIIDCQSIYDELYKLEATTDFTFEELQNYQAYIFLNSTLLTGSNELPNNPFYFGEL
DQDNTIKQDTPSYYFSPKDESSGLGRLSIFYKNDELCLLNYSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDK
KQAIAKLHALLENQNLECIHGGKVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKK
VNNEYVILQELISACKTDKGFALKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIRLHYKSDRFQKDNLPIYNLLI
NNEKKEQNKALNEFNIDLKDLKDIEDINILNQFKQDFSKDYEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKD
LGAGYFTQLHEYDKIIKNALEDNKELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVKI
>Mature_476_residues
MIGKDFLYSIHKDKKSIYLFCENKSIIDCQSIYDELYKLEATTDFTFEELQNYQAYIFLNSTLLTGSNELPNNPFYFGEL
DQDNTIKQDTPSYYFSPKDESSGLGRLSIFYKNDELCLLNYSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDK
KQAIAKLHALLENQNLECIHGGKVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKK
VNNEYVILQELISACKTDKGFALKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIRLHYKSDRFQKDNLPIYNLLI
NNEKKEQNKALNEFNIDLKDLKDIEDINILNQFKQDFSKDYEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKD
LGAGYFTQLHEYDKIIKNALEDNKELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54968; Mature: 54968

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKDFLYSIHKDKKSIYLFCENKSIIDCQSIYDELYKLEATTDFTFEELQNYQAYIFLN
CCCHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHEECCCCCCCHHHHCCCEEEEEEE
STLLTGSNELPNNPFYFGELDQDNTIKQDTPSYYFSPKDESSGLGRLSIFYKNDELCLLN
EEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEE
YSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDKKQAIAKLHALLENQNLECIH
HHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
GGKVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKK
CCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHH
VNNEYVILQELISACKTDKGFALKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIR
CCCCEEHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCHHCCCCCCCCCEECCCCEEE
LHYKSDRFQKDNLPIYNLLINNEKKEQNKALNEFNIDLKDLKDIEDINILNQFKQDFSKD
EEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCC
YEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKDLGAGYFTQLHEYDKIIKNAL
CCEEEEEEEECCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EDNKELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVKI
HCCHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEECCCCC
>Mature Secondary Structure
MIGKDFLYSIHKDKKSIYLFCENKSIIDCQSIYDELYKLEATTDFTFEELQNYQAYIFLN
CCCHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHEECCCCCCCHHHHCCCEEEEEEE
STLLTGSNELPNNPFYFGELDQDNTIKQDTPSYYFSPKDESSGLGRLSIFYKNDELCLLN
EEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEE
YSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDKKQAIAKLHALLENQNLECIH
HHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
GGKVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKK
CCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHH
VNNEYVILQELISACKTDKGFALKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIR
CCCCEEHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCHHCCCCCCCCCEECCCCEEE
LHYKSDRFQKDNLPIYNLLINNEKKEQNKALNEFNIDLKDLKDIEDINILNQFKQDFSKD
EEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCC
YEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKDLGAGYFTQLHEYDKIIKNAL
CCEEEEEEEECCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EDNKELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVKI
HCCHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA