| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is gltX [H]
Identifier: 57237686
GI number: 57237686
Start: 869783
End: 871078
Strand: Reverse
Name: gltX [H]
Synonym: CJE0932
Alternate gene names: 57237686
Gene position: 871078-869783 (Counterclockwise)
Preceding gene: 57237689
Following gene: 57237685
Centisome position: 49.0
GC content: 30.71
Gene sequence:
>1296_bases ATGTACCGTTTTGCACCTTCTCCCACAGGTGATATGCACATAGGAAATTTACGCGCAGCAATTTTTAATTATATCTGTGC AAGACAAAAAAATATGGATTTTATCTTACGTATTGAAGATACTGATAAGGCTAGAAATATAGCAGGAAAAGAAGAAGAAA TCAAAGAAATTTTAAATCTTTTTAGTATTTCATGGCAGCATTACTATATACAAAGTGAAAATTTAAAATTCCATCGCCAA ATGGCTTTAAAACTTGTAAGCGAAAAAAAAGCTTTTGCTTGTTTTTGCACCGAAGAAGAACTTGAAGCAAAAAAAGAGCT GGCTAAAAAACAAGGTAAAGCTTATCGCTACGATGGCACTTGTGAAAAACTAGCCGATATTGATGTTTTAGAATGTGAAA AACCCTTTGTTATCCGTCTTAAAAAACCTACTCATACTATGAAATTTACTGATTTTATCAAAGGCGAGCTTAGTTTTGAG CCTGAAAACATAGACTCTTTTGTGATTATGAGAACGGATAAAACTCCAACTTATAATTTTGCTTGTGCGGTTGATGATAT GCTTGAAAATGTCACTTGTATTATACGCGGAGAAGATCATGTTTCAAACACTCCAAAACAAGAACATATCCGCGCAAGCT TAGGTTATAATAAAGCCATGACTTATGCACACTTGCCTATCATTTTAAACGAAGAAGGTGTTAAAATGAGTAAAAGAGAA GCACATTCTTCTGTAAAATGGCTACTTGAAAGTGGAATTTTACCTAGCGCAATCGCAAATTATCTGATCATGCTAGGCAA TAAAACTCCTTGTGAAATTTTTACCTTAGAAAAGGCTATAAAATGGTTTGATATTTCTAAAGTTTCAAAAGCTCCCGCAA GATTTGATCTTAAAAAACTTTTGCAAATTAATCGCGAACATATCAAAATGATAAAAGATGATGAGCTTAATAAAATTTTA GATTTAAACAAAGATCTTGCACCACTTGCTAAATTTTACACTCAAGAAGCAAGTACTATAAAAGAACTTAAAGAAAAAAT GCAAGCTATTTTTAACGCAAAAAATTTTGGCGAGTTTGAAACAGAATGTAAAATTTTAAAAGAACTCTTAAAAGATATTG AACTTTTTGAAAATTATGAAGATTTTAAAAATGAACTTTTAAATAAAAGCAACTTAAAAGGTAAAAAATTTTTCATGCCT TTAAGGATAATTTTAACAGGAAATATCCACGGACCTGAGCTTAGTGATCTTTATCCTTATATTAAAAATTTTATTCACGA ATTAGCAAGGATTTAA
Upstream 100 bases:
>100_bases AATTAAAAATATCATAAAAGTATTATAACCAAGTAAAATTAAATATCCGTATAAATTTTTCTGTTATAATAAGCTTTTAA ATAATTTTAAAGGCTATAAG
Downstream 100 bases:
>100_bases CTATGGTTATAGACTCTTTTATTATTTCTATTTTTCAAGTACTTCAAATTGTCATTAACATTTATACTTGGATTATTATC ATCACAGCACTTTTAAGCTG
Product: glutamylglutaminyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase 1; GluRS 1 [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKARNIAGKEEEIKEILNLFSISWQHYYIQSENLKFHRQ MALKLVSEKKAFACFCTEEELEAKKELAKKQGKAYRYDGTCEKLADIDVLECEKPFVIRLKKPTHTMKFTDFIKGELSFE PENIDSFVIMRTDKTPTYNFACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNKAMTYAHLPIILNEEGVKMSKRE AHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTLEKAIKWFDISKVSKAPARFDLKKLLQINREHIKMIKDDELNKIL DLNKDLAPLAKFYTQEASTIKELKEKMQAIFNAKNFGEFETECKILKELLKDIELFENYEDFKNELLNKSNLKGKKFFMP LRIILTGNIHGPELSDLYPYIKNFIHELARI
Sequences:
>Translated_431_residues MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKARNIAGKEEEIKEILNLFSISWQHYYIQSENLKFHRQ MALKLVSEKKAFACFCTEEELEAKKELAKKQGKAYRYDGTCEKLADIDVLECEKPFVIRLKKPTHTMKFTDFIKGELSFE PENIDSFVIMRTDKTPTYNFACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNKAMTYAHLPIILNEEGVKMSKRE AHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTLEKAIKWFDISKVSKAPARFDLKKLLQINREHIKMIKDDELNKIL DLNKDLAPLAKFYTQEASTIKELKEKMQAIFNAKNFGEFETECKILKELLKDIELFENYEDFKNELLNKSNLKGKKFFMP LRIILTGNIHGPELSDLYPYIKNFIHELARI >Mature_431_residues MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKARNIAGKEEEIKEILNLFSISWQHYYIQSENLKFHRQ MALKLVSEKKAFACFCTEEELEAKKELAKKQGKAYRYDGTCEKLADIDVLECEKPFVIRLKKPTHTMKFTDFIKGELSFE PENIDSFVIMRTDKTPTYNFACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNKAMTYAHLPIILNEEGVKMSKRE AHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTLEKAIKWFDISKVSKAPARFDLKKLLQINREHIKMIKDDELNKIL DLNKDLAPLAKFYTQEASTIKELKEKMQAIFNAKNFGEFETECKILKELLKDIELFENYEDFKNELLNKSNLKGKKFFMP LRIILTGNIHGPELSDLYPYIKNFIHELARI
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=329, Percent_Identity=31.9148936170213, Blast_Score=172, Evalue=7e-43, Organism=Escherichia coli, GI1788743, Length=445, Percent_Identity=32.3595505617978, Blast_Score=231, Evalue=9e-62, Organism=Escherichia coli, GI226510925, Length=239, Percent_Identity=30.9623430962343, Blast_Score=122, Evalue=6e-29, Organism=Caenorhabditis elegans, GI71993394, Length=469, Percent_Identity=30.2771855010661, Blast_Score=169, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6324540, Length=347, Percent_Identity=33.1412103746398, Blast_Score=189, Evalue=5e-49, Organism=Drosophila melanogaster, GI24665321, Length=462, Percent_Identity=26.8398268398268, Blast_Score=178, Evalue=7e-45,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 50069; Mature: 50069
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKARNIAGKEEEIKEILNL CCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCCHHHHHHHHHH FSISWQHYYIQSENLKFHRQMALKLVSEKKAFACFCTEEELEAKKELAKKQGKAYRYDGT HHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCEECCCC CEKLADIDVLECEKPFVIRLKKPTHTMKFTDFIKGELSFEPENIDSFVIMRTDKTPTYNF HHHHCCCCCEECCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEE ACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNKAMTYAHLPIILNEEGVKMSKRE EEEHHHHHCCEEEEEECCHHCCCCCHHHHHHHHCCCCHHHHEEECCEEECCCCCCHHHHH AHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTLEKAIKWFDISKVSKAPARFDLKKL HHHHHHHHHHCCCCHHHHHHHHEEECCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHH LQINREHIKMIKDDELNKILDLNKDLAPLAKFYTQEASTIKELKEKMQAIFNAKNFGEFE HHHCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TECKILKELLKDIELFENYEDFKNELLNKSNLKGKKFFMPLRIILTGNIHGPELSDLYPY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHH IKNFIHELARI HHHHHHHHHCC >Mature Secondary Structure MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKARNIAGKEEEIKEILNL CCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCCHHHHHHHHHH FSISWQHYYIQSENLKFHRQMALKLVSEKKAFACFCTEEELEAKKELAKKQGKAYRYDGT HHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCEECCCC CEKLADIDVLECEKPFVIRLKKPTHTMKFTDFIKGELSFEPENIDSFVIMRTDKTPTYNF HHHHCCCCCEECCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEE ACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNKAMTYAHLPIILNEEGVKMSKRE EEEHHHHHCCEEEEEECCHHCCCCCHHHHHHHHCCCCHHHHEEECCEEECCCCCCHHHHH AHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTLEKAIKWFDISKVSKAPARFDLKKL HHHHHHHHHHCCCCHHHHHHHHEEECCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHH LQINREHIKMIKDDELNKILDLNKDLAPLAKFYTQEASTIKELKEKMQAIFNAKNFGEFE HHHCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH TECKILKELLKDIELFENYEDFKNELLNKSNLKGKKFFMPLRIILTGNIHGPELSDLYPY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHH IKNFIHELARI HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA