| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237678
Identifier: 57237678
GI number: 57237678
Start: 863033
End: 863974
Strand: Reverse
Name: 57237678
Synonym: CJE0924
Alternate gene names: NA
Gene position: 863974-863033 (Counterclockwise)
Preceding gene: 57237679
Following gene: 57237676
Centisome position: 48.6
GC content: 24.63
Gene sequence:
>942_bases ATGCAAATTAGCAATTTAGGCGAACTTTTAAACGCGATACTCATTCATGAAGGTAGCGTTTTAAGCGCGGAAGGTTTTGC CATAAATTTAAACGAACTTAAAGCAGGCTTTGCATTCTTTAATAACGATAAAAAAGAAATTACCCAAGCTGTAAAAAAAG GTGCTTATGCTATAATTACAGAAAATGACATTACTATTGAAGATAAAGATATTTTTTACTTTAGAGTAGAAAATCTAGAA CAAGCTCTTGTAAGATTTTTACGCTTTTTTTGTGAAGATAAAGAATGTGAATTTTTGCTTTTTAAATCTTACGAACTAAG TCTTTGCAAGGCTTTTTATTTTAACATTTTAAAAGGAAATATTTTTGCTGATTTTGAAAAACTAATCAAAGCAAAAAAGG GTGAAATTTTTTGCTACTGTGAAGAAAATTACTTAAATAAACTTTGTGCCTATTCTCATAGTCTAAAAGATGCTAATTTT ACCTTATTATCGCGATCTAGCTTCTTTTTTACAACTTTGATTTGTGAAAATTTATATTTTAAAAATCTTAATTTGCCTTT TTTTTACACAAATAGTTTTGCAAAAATTATTTCTTTTTTAAAAGAAAAAAATCAAAAAATAATATTTGACTTTAATAAGA TTGATGATTTTAAAATTTATTTTATTGATGATAAATTTGAAATCACTCCTTTTGGTTCAAGCTCTCAAGCGTTTATTGTA AGCAACAACCAAAATACCTTTGAATTCTGGAAAGAAAAATTTAAAAACATAAAAGACTTTAAAATTGCTTCTAAAAATTC TTTATTTTGCGATTTTTCCTATAATCAGCTTTCAGATTTAAGAAAATTAAAAAATTTTAAATATTGTTTAATTCTTGAAA ATTATGATATTTTTGAACAAGAATTTGAAAACAAAGAAAATCAAACCCCAAGCTTATTTTAA
Upstream 100 bases:
>100_bases TGAAAGCGATGGTATGATACTTTCTGCAAAAAGCGGAGATAAGCTTGTTTTAATCACCCCTGAACAACTTGTACAAAACG GTTCTTTAGTGGGTTAAAAT
Downstream 100 bases:
>100_bases ATTCACTCCTTCATTTTCAAGCAAAAATCTTTTTATTTCAAGCCCTCCATTATATCCTCCTATACCATTGCTTGCAATAA CTCTATGACAAGGTATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MQISNLGELLNAILIHEGSVLSAEGFAINLNELKAGFAFFNNDKKEITQAVKKGAYAIITENDITIEDKDIFYFRVENLE QALVRFLRFFCEDKECEFLLFKSYELSLCKAFYFNILKGNIFADFEKLIKAKKGEIFCYCEENYLNKLCAYSHSLKDANF TLLSRSSFFFTTLICENLYFKNLNLPFFYTNSFAKIISFLKEKNQKIIFDFNKIDDFKIYFIDDKFEITPFGSSSQAFIV SNNQNTFEFWKEKFKNIKDFKIASKNSLFCDFSYNQLSDLRKLKNFKYCLILENYDIFEQEFENKENQTPSLF
Sequences:
>Translated_313_residues MQISNLGELLNAILIHEGSVLSAEGFAINLNELKAGFAFFNNDKKEITQAVKKGAYAIITENDITIEDKDIFYFRVENLE QALVRFLRFFCEDKECEFLLFKSYELSLCKAFYFNILKGNIFADFEKLIKAKKGEIFCYCEENYLNKLCAYSHSLKDANF TLLSRSSFFFTTLICENLYFKNLNLPFFYTNSFAKIISFLKEKNQKIIFDFNKIDDFKIYFIDDKFEITPFGSSSQAFIV SNNQNTFEFWKEKFKNIKDFKIASKNSLFCDFSYNQLSDLRKLKNFKYCLILENYDIFEQEFENKENQTPSLF >Mature_313_residues MQISNLGELLNAILIHEGSVLSAEGFAINLNELKAGFAFFNNDKKEITQAVKKGAYAIITENDITIEDKDIFYFRVENLE QALVRFLRFFCEDKECEFLLFKSYELSLCKAFYFNILKGNIFADFEKLIKAKKGEIFCYCEENYLNKLCAYSHSLKDANF TLLSRSSFFFTTLICENLYFKNLNLPFFYTNSFAKIISFLKEKNQKIIFDFNKIDDFKIYFIDDKFEITPFGSSSQAFIV SNNQNTFEFWKEKFKNIKDFKIASKNSLFCDFSYNQLSDLRKLKNFKYCLILENYDIFEQEFENKENQTPSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36964; Mature: 36964
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQISNLGELLNAILIHEGSVLSAEGFAINLNELKAGFAFFNNDKKEITQAVKKGAYAIIT CCCHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHCCHHEECCCHHHHHHHHHCCCEEEEE ENDITIEDKDIFYFRVENLEQALVRFLRFFCEDKECEFLLFKSYELSLCKAFYFNILKGN CCCEEEECCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCC IFADFEKLIKAKKGEIFCYCEENYLNKLCAYSHSLKDANFTLLSRSSFFFTTLICENLYF HHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHE KNLNLPFFYTNSFAKIISFLKEKNQKIIFDFNKIDDFKIYFIDDKFEITPFGSSSQAFIV ECCCCCEEECCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECEEEEEECCCCCCEEEE SNNQNTFEFWKEKFKNIKDFKIASKNSLFCDFSYNQLSDLRKLKNFKYCLILENYDIFEQ ECCCCHHHHHHHHHCCCCCEEEECCCCEEEEECHHHHHHHHHHCCCEEEEEEECCCHHHH EFENKENQTPSLF HHCCCCCCCCCCC >Mature Secondary Structure MQISNLGELLNAILIHEGSVLSAEGFAINLNELKAGFAFFNNDKKEITQAVKKGAYAIIT CCCHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHCCHHEECCCHHHHHHHHHCCCEEEEE ENDITIEDKDIFYFRVENLEQALVRFLRFFCEDKECEFLLFKSYELSLCKAFYFNILKGN CCCEEEECCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCC IFADFEKLIKAKKGEIFCYCEENYLNKLCAYSHSLKDANFTLLSRSSFFFTTLICENLYF HHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHE KNLNLPFFYTNSFAKIISFLKEKNQKIIFDFNKIDDFKIYFIDDKFEITPFGSSSQAFIV ECCCCCEEECCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECEEEEEECCCCCCEEEE SNNQNTFEFWKEKFKNIKDFKIASKNSLFCDFSYNQLSDLRKLKNFKYCLILENYDIFEQ ECCCCHHHHHHHHHCCCCCEEEECCCCEEEEECHHHHHHHHHHCCCEEEEEEECCCHHHH EFENKENQTPSLF HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA