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The map label for this gene is ubiX [C]

Identifier: 57237613

GI number: 57237613

Start: 797373

End: 797936

Strand: Reverse

Name: ubiX [C]

Synonym: CJE0859

Alternate gene names: 57237613

Gene position: 797936-797373 (Counterclockwise)

Preceding gene: 57237614

Following gene: 57237612

Centisome position: 44.88

GC content: 30.14

Gene sequence:

>564_bases
ATGAAAGTTTTATTGGGAATTTCTGGTTCAAGCAGTGTCAATTTAGGCTTAAAATTATTAAAAAATTTAGAAAATCAATG
CGAACTTTATTGTATTTTAACCCAAGGTGCAAAACTTAACTTCAAAACTGAAAATCAAGCAAATTTAGAAGAAATTTGTC
AAGAAAATTTTAAATACACTCATTTTTTAGATGATAAAAATTTAAGTCTAAGTGTAGCAAGTGGATCTTTTGGAATAGAA
AAAACCATCATTGCTCCTTGTTCAATTTCAAGTTTAGCAAAAATTCACGCTGGTTTTGCAGACACTCTTTTAATGCGTGC
TGCAGCAGTAGCCCTAAAAGAAAGAAAAAAACTCATCTTAGGGGTACGTGAAATGCCTTTTTCTACTTTAAATTTAGAAC
ATATGTTAAAACTTAGCCAAATGGGAGTTATCATCGCCCCTCCTATTATCGCAAGCTATTCTAAAGCAAACAATCTAGAG
CAAATGGAAAATTTTATCGCAGGTAAATGGTTAGATCTTTTAGAAATAAAACACAATTTATATGAAAAATGGCAAAATTT
TTAG

Upstream 100 bases:

>100_bases
CTTTGCAAAGTGCAAATATGGGCGAAAGGATTCGTGCAAAAAACAAAGAAGGTAAAGTTATGCAAGGTATCGTAGTGGGT
AAAAATAGGATGATTATACA

Downstream 100 bases:

>100_bases
TTTAAATTTGTTATATTTTTAAAAAAAATTGGAGCAAAAATGACTTGTTTATATCCTGGGACTTTTGATCCTATTACCAA
CGGGCATTTAGATGTTATAA

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLNFKTENQANLEEICQENFKYTHFLDDKNLSLSVASGSFGIE
KTIIAPCSISSLAKIHAGFADTLLMRAAAVALKERKKLILGVREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLE
QMENFIAGKWLDLLEIKHNLYEKWQNF

Sequences:

>Translated_187_residues
MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLNFKTENQANLEEICQENFKYTHFLDDKNLSLSVASGSFGIE
KTIIAPCSISSLAKIHAGFADTLLMRAAAVALKERKKLILGVREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLE
QMENFIAGKWLDLLEIKHNLYEKWQNF
>Mature_187_residues
MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLNFKTENQANLEEICQENFKYTHFLDDKNLSLSVASGSFGIE
KTIIAPCSISSLAKIHAGFADTLLMRAAAVALKERKKLILGVREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLE
QMENFIAGKWLDLLEIKHNLYEKWQNF

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family

Homologues:

Organism=Escherichia coli, GI1788650, Length=189, Percent_Identity=33.8624338624339, Blast_Score=116, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6320746, Length=186, Percent_Identity=33.8709677419355, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAAD_CAMJE (Q9PPF1)

Other databases:

- EMBL:   AL111168
- PIR:   H81347
- RefSeq:   YP_002344175.1
- ProteinModelPortal:   Q9PPF1
- SMR:   Q9PPF1
- IntAct:   Q9PPF1
- GeneID:   905078
- GenomeReviews:   AL111168_GR
- KEGG:   cje:Cj0768c
- HOGENOM:   HBG297290
- OMA:   MENFIVG
- PhylomeDB:   Q9PPF1
- ProtClustDB:   PRK06029
- BioCyc:   CJEJ192222:CJ0768C-MONOMER
- InterPro:   IPR003382
- InterPro:   IPR004507
- Gene3D:   G3DSA:3.40.50.1950
- TIGRFAMs:   TIGR00421

Pfam domain/function: PF02441 Flavoprotein; SSF52507 Flavoprotein

EC number: 4.1.1.- [C]

Molecular weight: Translated: 20891; Mature: 20891

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: BINDING 34-34 BINDING 123-123

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLNFKTENQANLEEICQENFKYT
CEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCCCHHHHHHCCCCEE
HFLDDKNLSLSVASGSFGIEKTIIAPCSISSLAKIHAGFADTLLMRAAAVALKERKKLIL
EEECCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GVREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLEQMENFIAGKWLDLLEIKHNL
HHHHCCCCCCCHHHHHHHHHCCEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YEKWQNF
HHHHHCC
>Mature Secondary Structure
MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLNFKTENQANLEEICQENFKYT
CEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCCCHHHHHHCCCCEE
HFLDDKNLSLSVASGSFGIEKTIIAPCSISSLAKIHAGFADTLLMRAAAVALKERKKLIL
EEECCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
GVREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLEQMENFIAGKWLDLLEIKHNL
HHHHCCCCCCCHHHHHHHHHCCEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YEKWQNF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204