Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

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The map label for this gene is 57237579

Identifier: 57237579

GI number: 57237579

Start: 516948

End: 518240

Strand: Direct

Name: 57237579

Synonym: CJE0577

Alternate gene names: NA

Gene position: 516948-518240 (Clockwise)

Preceding gene: 57237578

Following gene: 57237580

Centisome position: 29.08

GC content: 32.17

Gene sequence:

>1293_bases
ATGAAATTAAAAATCGATTTTTCTTACACTCCGGCACAACTTAAAGTTTTTGATGATAAAAATCCACGCTTTATAACTGT
AGCAAAGGGCAGAAGACTTGGTTTTACAAGGGGAAGTGCTAAGTTTGTTATCGAAAACTTGCTTTTAGGACAAAATGTTT
TATGGGTGGATACCATACAAGCAAATTTACAAAATTATTACGAGTTATATTTTACACCTGAGTTAAAAAACTTGCCAAAA
GATTTTTACTCATGGAGTGTGCAAGATAAGAAACTAATTATTAATGGAGCAGTGCTTCATATGAGAAGTGCTGAAAGAAG
TGAAAATATCGAAGGTTTTGGATATGACCTTGTTATCTTAAACGAAGCAGGAATTATTTTAAAAGGTAGTAAAGGAGAGT
ATCTTTGGTATAACGCTATAAGACCTATGTTGCTTGATAACCCTAAATCAAGAGCGATTATCGGTGGAGTTCCTAAAGGA
AAAAATCTATTTTATGAACTTTGCAGAAAAGAACTCAGCGATAAAAATTGGAAACATTTTCAATTCTCAAGTTATGATAA
TCCATTTTTAAAAGAAGAGCAAATTAAAGAATTAATTGAAGAAGTAGGCGGAGAAGGTAGTGAAGTTGTCAAGCAAGAAA
TTTATGGCGAGTTTATAGATAGCTCGAGTGCTGAATTATTTTCTCTAAGTGAAATTGAAAATGCGATGAGCAAGAACTCT
TTTAGTATTGAAAAAATGCAAGGCGAGAATATTTGGGGGCTTGATGTAGCAAGATATGGAGATGATAAGAGTGCTTTAGC
AAAAAGAAAAGGTTTTGTAATTTATGAGATTAAAAAATACTCACAACTTGGAACTATAGAATTAGCAAACAAAATACTAG
CCGAATACAATCAAAGCGAAGATAAACCAAAAGGTATTTTTATAGATACCTGTGGTCTTGGCGTTGGCGTATATGATGTC
TTGTTAAATTATGGTTTGCCTGTATTTGAGGCAAATTCTGCAAATTCTGCAACCAGTAATGAATACTTAAATAAAAGAGC
GCAAATGTATTTTACATTTACTAAAAACTTAAAACACATGGAGCTTGTTAAAGATGAAGAATTAAAAAAAGATATGAGAA
TGATTGAATATGAATATAGCGACAAGGGGCTTTTAAAGATAGTTTCAAAAGAACAATTAAAAAAGAACTATGGCAAAAGT
CCTGATGTTAGCGATGCGGTGGCATTAACTTTTTTTGAAAAACTATACAGCAGAAACAATACTAATGAAGATTGGAGTTA
TGATGGCTGGTGA

Upstream 100 bases:

>100_bases
TTAGTATGTTCTTGCTAAAAAATCAACATGGATATGTGGATAAACAAGAAGTTGTCAGCGATAACGTTCAAAAAATTGAA
ATTATAAGAAGTGAAATCAA

Downstream 100 bases:

>100_bases
GTTTTTAATGATCTATGATGCAATTGATGTAAACAAAATAAAAAAGCTTTCAAATTTAAGCGATGAGGCTATAAAGTCAA
GTCTTGCAAATGAATTTTTA

Product: terminase B protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVIENLLLGQNVLWVDTIQANLQNYYELYFTPELKNLPK
DFYSWSVQDKKLIINGAVLHMRSAERSENIEGFGYDLVILNEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKG
KNLFYELCRKELSDKNWKHFQFSSYDNPFLKEEQIKELIEEVGGEGSEVVKQEIYGEFIDSSSAELFSLSEIENAMSKNS
FSIEKMQGENIWGLDVARYGDDKSALAKRKGFVIYEIKKYSQLGTIELANKILAEYNQSEDKPKGIFIDTCGLGVGVYDV
LLNYGLPVFEANSANSATSNEYLNKRAQMYFTFTKNLKHMELVKDEELKKDMRMIEYEYSDKGLLKIVSKEQLKKNYGKS
PDVSDAVALTFFEKLYSRNNTNEDWSYDGW

Sequences:

>Translated_430_residues
MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVIENLLLGQNVLWVDTIQANLQNYYELYFTPELKNLPK
DFYSWSVQDKKLIINGAVLHMRSAERSENIEGFGYDLVILNEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKG
KNLFYELCRKELSDKNWKHFQFSSYDNPFLKEEQIKELIEEVGGEGSEVVKQEIYGEFIDSSSAELFSLSEIENAMSKNS
FSIEKMQGENIWGLDVARYGDDKSALAKRKGFVIYEIKKYSQLGTIELANKILAEYNQSEDKPKGIFIDTCGLGVGVYDV
LLNYGLPVFEANSANSATSNEYLNKRAQMYFTFTKNLKHMELVKDEELKKDMRMIEYEYSDKGLLKIVSKEQLKKNYGKS
PDVSDAVALTFFEKLYSRNNTNEDWSYDGW
>Mature_430_residues
MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVIENLLLGQNVLWVDTIQANLQNYYELYFTPELKNLPK
DFYSWSVQDKKLIINGAVLHMRSAERSENIEGFGYDLVILNEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKG
KNLFYELCRKELSDKNWKHFQFSSYDNPFLKEEQIKELIEEVGGEGSEVVKQEIYGEFIDSSSAELFSLSEIENAMSKNS
FSIEKMQGENIWGLDVARYGDDKSALAKRKGFVIYEIKKYSQLGTIELANKILAEYNQSEDKPKGIFIDTCGLGVGVYDV
LLNYGLPVFEANSANSATSNEYLNKRAQMYFTFTKNLKHMELVKDEELKKDMRMIEYEYSDKGLLKIVSKEQLKKNYGKS
PDVSDAVALTFFEKLYSRNNTNEDWSYDGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49416; Mature: 49416

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVIENLLLGQNVLWVDTIQ
CEEEEEECCCCCEEEEEECCCCCEEEEECCCEECCCCCCHHHHHHHHHHCCCEEEEHHHH
ANLQNYYELYFTPELKNLPKDFYSWSVQDKKLIINGAVLHMRSAERSENIEGFGYDLVIL
HHHCCEEEEEECCCHHHCCHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEE
NEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKGKNLFYELCRKELSDKNWKHF
ECCCEEEECCCCCEEEECCCCCCEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEE
QFSSYDNPFLKEEQIKELIEEVGGEGSEVVKQEIYGEFIDSSSAELFSLSEIENAMSKNS
EECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCC
FSIEKMQGENIWGLDVARYGDDKSALAKRKGFVIYEIKKYSQLGTIELANKILAEYNQSE
CEEEEECCCCEEEEEHEECCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC
DKPKGIFIDTCGLGVGVYDVLLNYGLPVFEANSANSATSNEYLNKRAQMYFTFTKNLKHM
CCCCCEEEEECCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHEEEEEEECCCCHH
ELVKDEELKKDMRMIEYEYSDKGLLKIVSKEQLKKNYGKSPDVSDAVALTFFEKLYSRNN
HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
TNEDWSYDGW
CCCCCCCCCC
>Mature Secondary Structure
MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVIENLLLGQNVLWVDTIQ
CEEEEEECCCCCEEEEEECCCCCEEEEECCCEECCCCCCHHHHHHHHHHCCCEEEEHHHH
ANLQNYYELYFTPELKNLPKDFYSWSVQDKKLIINGAVLHMRSAERSENIEGFGYDLVIL
HHHCCEEEEEECCCHHHCCHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEE
NEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKGKNLFYELCRKELSDKNWKHF
ECCCEEEECCCCCEEEECCCCCCEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEE
QFSSYDNPFLKEEQIKELIEEVGGEGSEVVKQEIYGEFIDSSSAELFSLSEIENAMSKNS
EECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCC
FSIEKMQGENIWGLDVARYGDDKSALAKRKGFVIYEIKKYSQLGTIELANKILAEYNQSE
CEEEEECCCCEEEEEHEECCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC
DKPKGIFIDTCGLGVGVYDVLLNYGLPVFEANSANSATSNEYLNKRAQMYFTFTKNLKHM
CCCCCEEEEECCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHEEEEEEECCCCHH
ELVKDEELKKDMRMIEYEYSDKGLLKIVSKEQLKKNYGKSPDVSDAVALTFFEKLYSRNN
HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
TNEDWSYDGW
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA