| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237575
Identifier: 57237575
GI number: 57237575
Start: 514508
End: 515509
Strand: Direct
Name: 57237575
Synonym: CJE0573
Alternate gene names: NA
Gene position: 514508-515509 (Clockwise)
Preceding gene: 57237574
Following gene: 57237576
Centisome position: 28.94
GC content: 28.94
Gene sequence:
>1002_bases ATGATACCAAGTTTTATAGCAAGCTTTGATGTGGCTGTCGGGCGAAAAAGATTGAGAGAAAGAAAAGGCTATTTGAAATT ATCAAACACTATAGCTTATGGAGGACTTAGTGTTGATGCTCTGGCATTATATATACAACTAGCTAAACTTAGTGAAAAAA CGATTATAAGCGAGATCTATCTAAGAGAGTTTATAAAAGTTAAAAATAATCAAAGAATGAGTTTAAATAGATTAAGAATT GCCAAAAAAGAATTAATTGAACTCAGACTTTTAGAAATTAAAAAGGTTAGAAATGGCTCTTTAAATTTTTATGAGTGGAT TTTAAAAGATGAAAATTATCAAATTAAAAAACATTTTAACAAAGCTTTATCTTTGCTTAAAAGCAGTGATGAAAAGCTAA GCAAAACTCTTAAAAATAACACTTCATCAATCGACAGAAAATCAACTACTGAAAACGAAAAAAAAGAGAATTTACATTAT ATAGAAACACGCACGCACGCACACGATAATAAATTTATAAATAATATAAATATTAATAATAATAAATTTATAAAAAAAGA GAATTTAGAAAATTTAAAAAATAATCAAGAAAAGAAAGAATGCGTTTCTAATCAAAACGCCTCTTTTGTGACGAGCTTTA TTGATTTTGGCAAAAAGGAGTTAGAGAAAATGGCAAAAAAAGAGTTTAAAGTCCCAAATGCAAATGAACTCATGAGACAA ATAATAGCTTTTAATGAGAAAAATGGCACAAACTTTGGTGAAGAGTTGGCTAATGATTTTATAGGCTATTGGGATGCTAG GGAATGGAAAAGAAATGGAAAAAGAATGTCAAGTGTGGTAGGAAGTCTTTATACATGGCTTAAATACGCTAAAGAAAATG AAGCAAGAAAAAATCATCGTTTTAACAGAAAAAAAGAAGCCAATCCTAGTGTGGTTGATAGCTTGATGGAGTATTACGGA ATGAAAGATGAGAACAAAAACAAGCTCTTAGGATGCTTTTAA
Upstream 100 bases:
>100_bases TTGCTACTAGTGAATTTGTAAATAATAGATTAGAAAAAATCATAGAAATTATAGATTTGAATCTTGATAAGCAAATCAAA GAATTACAAGGATTTAAAAA
Downstream 100 bases:
>100_bases GGAGTAAAAAATGCAAGAAAAAATACAAATTTTAATGGACTTATTGGAAATTAATAAGGCTCAAGCAACTGATATTGTAG GTAGATATCTCAAAAGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MIPSFIASFDVAVGRKRLRERKGYLKLSNTIAYGGLSVDALALYIQLAKLSEKTIISEIYLREFIKVKNNQRMSLNRLRI AKKELIELRLLEIKKVRNGSLNFYEWILKDENYQIKKHFNKALSLLKSSDEKLSKTLKNNTSSIDRKSTTENEKKENLHY IETRTHAHDNKFINNININNNKFIKKENLENLKNNQEKKECVSNQNASFVTSFIDFGKKELEKMAKKEFKVPNANELMRQ IIAFNEKNGTNFGEELANDFIGYWDAREWKRNGKRMSSVVGSLYTWLKYAKENEARKNHRFNRKKEANPSVVDSLMEYYG MKDENKNKLLGCF
Sequences:
>Translated_333_residues MIPSFIASFDVAVGRKRLRERKGYLKLSNTIAYGGLSVDALALYIQLAKLSEKTIISEIYLREFIKVKNNQRMSLNRLRI AKKELIELRLLEIKKVRNGSLNFYEWILKDENYQIKKHFNKALSLLKSSDEKLSKTLKNNTSSIDRKSTTENEKKENLHY IETRTHAHDNKFINNININNNKFIKKENLENLKNNQEKKECVSNQNASFVTSFIDFGKKELEKMAKKEFKVPNANELMRQ IIAFNEKNGTNFGEELANDFIGYWDAREWKRNGKRMSSVVGSLYTWLKYAKENEARKNHRFNRKKEANPSVVDSLMEYYG MKDENKNKLLGCF >Mature_333_residues MIPSFIASFDVAVGRKRLRERKGYLKLSNTIAYGGLSVDALALYIQLAKLSEKTIISEIYLREFIKVKNNQRMSLNRLRI AKKELIELRLLEIKKVRNGSLNFYEWILKDENYQIKKHFNKALSLLKSSDEKLSKTLKNNTSSIDRKSTTENEKKENLHY IETRTHAHDNKFINNININNNKFIKKENLENLKNNQEKKECVSNQNASFVTSFIDFGKKELEKMAKKEFKVPNANELMRQ IIAFNEKNGTNFGEELANDFIGYWDAREWKRNGKRMSSVVGSLYTWLKYAKENEARKNHRFNRKKEANPSVVDSLMEYYG MKDENKNKLLGCF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39077; Mature: 39077
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS00697 DNA_LIGASE_A1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSFIASFDVAVGRKRLRERKGYLKLSNTIAYGGLSVDALALYIQLAKLSEKTIISEIY CCCHHHHHHHHHHHHHHHHHHHCCEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LREFIKVKNNQRMSLNRLRIAKKELIELRLLEIKKVRNGSLNFYEWILKDENYQIKKHFN HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHH KALSLLKSSDEKLSKTLKNNTSSIDRKSTTENEKKENLHYIETRTHAHDNKFINNININN HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCCCHHHCCCCCCC NKFIKKENLENLKNNQEKKECVSNQNASFVTSFIDFGKKELEKMAKKEFKVPNANELMRQ CCEECHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHH IIAFNEKNGTNFGEELANDFIGYWDAREWKRNGKRMSSVVGSLYTWLKYAKENEARKNHR HHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FNRKKEANPSVVDSLMEYYGMKDENKNKLLGCF CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIPSFIASFDVAVGRKRLRERKGYLKLSNTIAYGGLSVDALALYIQLAKLSEKTIISEIY CCCHHHHHHHHHHHHHHHHHHHCCEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LREFIKVKNNQRMSLNRLRIAKKELIELRLLEIKKVRNGSLNFYEWILKDENYQIKKHFN HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHH KALSLLKSSDEKLSKTLKNNTSSIDRKSTTENEKKENLHYIETRTHAHDNKFINNININN HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCCCHHHCCCCCCC NKFIKKENLENLKNNQEKKECVSNQNASFVTSFIDFGKKELEKMAKKEFKVPNANELMRQ CCEECHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHH IIAFNEKNGTNFGEELANDFIGYWDAREWKRNGKRMSSVVGSLYTWLKYAKENEARKNHR HHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FNRKKEANPSVVDSLMEYYGMKDENKNKLLGCF CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA