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The map label for this gene is 57237568

Identifier: 57237568

GI number: 57237568

Start: 510498

End: 511151

Strand: Reverse

Name: 57237568

Synonym: CJE0566

Alternate gene names: NA

Gene position: 511151-510498 (Counterclockwise)

Preceding gene: 57237569

Following gene: 57237567

Centisome position: 28.75

GC content: 29.66

Gene sequence:

>654_bases
ATGAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCTTTTGCTGACTATACGCAATATAAACCAAGCGAAGAGTT
TGCTAAGTATTTTACTAAGCAAAGTTGTTCGCAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATCTAA
AAGGTACTAAAGCAGTGGCTTATAAATTAGAAGTAGATAATCTAAAAGGCGAACAAATCAAAAAGCGCCCGCGCTTTGAA
GATGATACAAATATCCCTAAAAAATATCGTACCACTTGGAGTGATTATAAAAATAGTGGTTATGATAGAGGACACACTCT
TTCTAATGCCTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACATTCTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTCAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTAGTTAATTATGACAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATTAAAATCTTAAA
AGGTGAGAATTTTAAAGAATGTTACCAAGTACCAAATCATGAAGTTGAAGATGAGAATATAAGAAAATATAAGATTGATT
GTGATAAAATATAA

Upstream 100 bases:

>100_bases
AAAATTTAGAAAAAGTGCATTTTAACTTTGAACCTTTTTATGATGAAGAAAACCAAAGCAGAACTTTAAAAGAAATGATT
AAAGCAACAAGTTAAACAAA

Downstream 100 bases:

>100_bases
TAGAATGGGGTGCTTTTTGCTTACATTTTATTAATCTTTGTTATGTTGGTGTCGATATAATAAAAATTAGGAGATTAAAA
TGGATAATTTAAAACTAGAA

Product: DNA/RNA non-specific endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKKLILLPLLSTLAFADYTQYKPSEEFAKYFTKQSCSQVLDKFYYLNCYDYNLKGTKAVAYKLEVDNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVASKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKILKGENFKECYQVPNHEVEDENIRKYKIDCDKI

Sequences:

>Translated_217_residues
MKKLILLPLLSTLAFADYTQYKPSEEFAKYFTKQSCSQVLDKFYYLNCYDYNLKGTKAVAYKLEVDNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVASKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKILKGENFKECYQVPNHEVEDENIRKYKIDCDKI
>Mature_217_residues
MKKLILLPLLSTLAFADYTQYKPSEEFAKYFTKQSCSQVLDKFYYLNCYDYNLKGTKAVAYKLEVDNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVASKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKILKGENFKECYQVPNHEVEDENIRKYKIDCDKI

Specific function: Unknown

COG id: COG1864

COG function: function code F; DNA/RNA endonuclease G, NUC1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA/RNA non-specific endonuclease family [H]

Homologues:

Organism=Homo sapiens, GI53759134, Length=221, Percent_Identity=29.8642533936652, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17505967, Length=193, Percent_Identity=28.4974093264249, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322253, Length=182, Percent_Identity=26.3736263736264, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24581065, Length=195, Percent_Identity=25.6410256410256, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018524
- InterPro:   IPR001604
- InterPro:   IPR020821 [H]

Pfam domain/function: PF01223 Endonuclease_NS [H]

EC number: NA

Molecular weight: Translated: 25608; Mature: 25608

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLILLPLLSTLAFADYTQYKPSEEFAKYFTKQSCSQVLDKFYYLNCYDYNLKGTKAVA
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEE
YKLEVDNLKGEQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQR
EEEEECCCCCHHHHHCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHH
STFLMSNITPQNPQINQRVWNKIEKRERQVASKLGSLEVLNLVNYDNNPQRIRNQIAIPS
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCHHHHHHHHCCCH
SYIKILKGENFKECYQVPNHEVEDENIRKYKIDCDKI
HHHHHHCCCCHHHHHCCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MKKLILLPLLSTLAFADYTQYKPSEEFAKYFTKQSCSQVLDKFYYLNCYDYNLKGTKAVA
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEE
YKLEVDNLKGEQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQR
EEEEECCCCCHHHHHCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHH
STFLMSNITPQNPQINQRVWNKIEKRERQVASKLGSLEVLNLVNYDNNPQRIRNQIAIPS
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCHHHHHHHHCCCH
SYIKILKGENFKECYQVPNHEVEDENIRKYKIDCDKI
HHHHHHCCCCHHHHHCCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]