Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

Click here to switch to the map view.

The map label for this gene is 57237558

Identifier: 57237558

GI number: 57237558

Start: 505468

End: 506322

Strand: Reverse

Name: 57237558

Synonym: CJE0556

Alternate gene names: NA

Gene position: 506322-505468 (Counterclockwise)

Preceding gene: 57237559

Following gene: 57237557

Centisome position: 28.48

GC content: 29.47

Gene sequence:

>855_bases
ATGAATTGCAGAATAATTAACTTAGAACAAGGTAGCCATGAATGGTTAAATTTTAGAAAAGGAAAAATAGGTGCATCGAT
GGTAGCATCTTGCGTAGGTATCAAAGGTGCTTTTAATTCCAAAGAAGAAGCAAAAGATATCATCTTGGGACTTAAAGAAG
TTTATCAAAATGAAGCTATGAAAAAAGGCAATAACTATGAAGCTTTGATTAGAGCTAGAGTTGAGTTTTTACATTCTGTG
AGTATCACTCCTGTAGTTTTGCAAAGTCTAGAAAATGAAATGTTTATAGCAAGTTTAGATGGTATTGATGAAAATGGGGT
TGTTTATGAGTTTAAATATTCGCAAGATGAGTATGATTTTATCAAAAGAAATAAAAAGCCAAGTGATAAATACTACGCTC
AAGTGCAATTTCAACTCTATATCAGTGGTAAAGAAAAATGCATTTTTGTAGCCATGAATAAAGAAGAAGAGATTGTAGAG
TGCGAAGTTTCAAAAGATGAAGCTTATCAAGAATGGTTGGTTAAAAATATAAAGCAATTTATATTAGATTATATCATAGA
TCAAAAAAGTGAATATAAAGAGCTTGAAGATACTAAAGCAAAAAATCTAACGATTGAAATTATAAGGCTTGAAAACACGA
TTAAACCTATTAAAGAAAAGCTAGAAAGTCTTAAAAAAGAACTCATAGCCTTAGCAAATGGAGAAAAAGCAAGATGTTTG
GATATTACAATTTATCCGCAAAGTAGAACTACAATTGATTATAAGGGCTTTTTAGAGCAAAAAAATATTACTGTGCCTAA
AGAGTTTTATAAAGAAAGTATTTCAATGTGTTTAAAAATCAAAAAAGGAGCATAA

Upstream 100 bases:

>100_bases
CGAAATAAAGGTTATGAAATAGAAACAGTTAGAAACAAAGAAACGAGAAATACTTTTTATATTTTAAAAAGCACTCCAAA
AATAAAAAAGGCAGGATAAA

Downstream 100 bases:

>100_bases
AATGAGTAATGAAGTTGTATTAAAAGAAGAAAATAAATTAGAAATAAATTTTAATCCTTATGAGTTGGCTTTGGTAAAAG
GTGATTTATCAAAACTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MNCRIINLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEEAKDIILGLKEVYQNEAMKKGNNYEALIRARVEFLHSV
SITPVVLQSLENEMFIASLDGIDENGVVYEFKYSQDEYDFIKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVE
CEVSKDEAYQEWLVKNIKQFILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCL
DITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA

Sequences:

>Translated_284_residues
MNCRIINLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEEAKDIILGLKEVYQNEAMKKGNNYEALIRARVEFLHSV
SITPVVLQSLENEMFIASLDGIDENGVVYEFKYSQDEYDFIKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVE
CEVSKDEAYQEWLVKNIKQFILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCL
DITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA
>Mature_284_residues
MNCRIINLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEEAKDIILGLKEVYQNEAMKKGNNYEALIRARVEFLHSV
SITPVVLQSLENEMFIASLDGIDENGVVYEFKYSQDEYDFIKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVE
CEVSKDEAYQEWLVKNIKQFILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCL
DITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32868; Mature: 32868

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCRIINLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEEAKDIILGLKEVYQNEAM
CCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KKGNNYEALIRARVEFLHSVSITPVVLQSLENEMFIASLDGIDENGVVYEFKYSQDEYDF
HCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCHHHH
IKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVECEVSKDEAYQEWLVKNIKQF
HHCCCCCCCCEEEEEEEEEEEECCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHH
ILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCL
HHHHHHCCCHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
DITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA
EEEEECCCCCEEEHHCCCCCCCCCCCHHHHHHHHHHHHEECCCC
>Mature Secondary Structure
MNCRIINLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEEAKDIILGLKEVYQNEAM
CCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KKGNNYEALIRARVEFLHSVSITPVVLQSLENEMFIASLDGIDENGVVYEFKYSQDEYDF
HCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCHHHH
IKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVECEVSKDEAYQEWLVKNIKQF
HHCCCCCCCCEEEEEEEEEEEECCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHH
ILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCL
HHHHHHCCCHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
DITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA
EEEEECCCCCEEEHHCCCCCCCCCCCHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA