| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57237509
Identifier: 57237509
GI number: 57237509
Start: 458523
End: 459050
Strand: Reverse
Name: 57237509
Synonym: CJE0505
Alternate gene names: NA
Gene position: 459050-458523 (Counterclockwise)
Preceding gene: 57237510
Following gene: 57237508
Centisome position: 25.82
GC content: 27.46
Gene sequence:
>528_bases ATGACTTATAGCTTCATACAGCCAAGAAAAAAACCTATTTTCACACTCTTTGATAAAATTTGGCTAGGACTTTTTGGTTT TAGTATATTATTTATCTTGCTAGTATATTTTACATATACAATAAAAATTGCATTAATCAATAGCTCTATCGATAATGAAA AACAACAAGTTATAGTGCTTCAAAATCAAACTAAGCAAAATGAAATGCTTTATGAAATTTTATTTGATCAAAGCCAAATA GCGAAAAATTTTAACACTCAAAATCAAATTGTTAAAGAAAGCTTAAGAAATCTATTTGATATTATTGTAAAAACTGATAA TATTACTCTTGAAAGTGTTGAACAAGACGAATATTCCTTAAAACTTATCGGAGTCACTCCTACAAGAGAAATGTTTACTC TACTTTTAGAAACCCCTTTAAAAAGCATCTTTGATCAAAGCTATACAATCTATTATCGCTTAGATAATGGGTGGTATCGT TTTGTTAGTATTAGTAAACAAATTCCAGGAGTTGCAGATGAAAGATAA
Upstream 100 bases:
>100_bases GTGCTATTGATTTTTTAGAAAGTGAAACTTTTTTAGAGATAAAAACGAAACAAATCAACACCTTAGATCTTATGATAGAA TTGATGCAAAAGGAGCTTAA
Downstream 100 bases:
>100_bases AAGTCTAGAAGAAATTGATTTATTAAAGCTTATCATTTGCGCGTTAAGTTTTATAAGCGTTTGCACAGCCTTGATCTTAT TTTTACTTTTACCGACATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIALINSSIDNEKQQVIVLQNQTKQNEMLYEILFDQSQI AKNFNTQNQIVKESLRNLFDIIVKTDNITLESVEQDEYSLKLIGVTPTREMFTLLLETPLKSIFDQSYTIYYRLDNGWYR FVSISKQIPGVADER
Sequences:
>Translated_175_residues MTYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIALINSSIDNEKQQVIVLQNQTKQNEMLYEILFDQSQI AKNFNTQNQIVKESLRNLFDIIVKTDNITLESVEQDEYSLKLIGVTPTREMFTLLLETPLKSIFDQSYTIYYRLDNGWYR FVSISKQIPGVADER >Mature_174_residues TYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIALINSSIDNEKQQVIVLQNQTKQNEMLYEILFDQSQIA KNFNTQNQIVKESLRNLFDIIVKTDNITLESVEQDEYSLKLIGVTPTREMFTLLLETPLKSIFDQSYTIYYRLDNGWYRF VSISKQIPGVADER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20650; Mature: 20519
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIALINSSIDNEKQQVIVL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEE QNQTKQNEMLYEILFDQSQIAKNFNTQNQIVKESLRNLFDIIVKTDNITLESVEQDEYSL ECCCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEE KLIGVTPTREMFTLLLETPLKSIFDQSYTIYYRLDNGWYRFVSISKQIPGVADER EEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure TYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIALINSSIDNEKQQVIVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEE QNQTKQNEMLYEILFDQSQIAKNFNTQNQIVKESLRNLFDIIVKTDNITLESVEQDEYSL ECCCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEE KLIGVTPTREMFTLLLETPLKSIFDQSYTIYYRLDNGWYRFVSISKQIPGVADER EEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA