| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237508
Identifier: 57237508
GI number: 57237508
Start: 458015
End: 458533
Strand: Reverse
Name: 57237508
Synonym: CJE0504
Alternate gene names: NA
Gene position: 458533-458015 (Counterclockwise)
Preceding gene: 57237509
Following gene: 57237504
Centisome position: 25.79
GC content: 27.17
Gene sequence:
>519_bases ATGAAAGATAAAAGTCTAGAAGAAATTGATTTATTAAAGCTTATCATTTGCGCGTTAAGTTTTATAAGCGTTTGCACAGC CTTGATCTTATTTTTACTTTTACCGACATTAAAAAATTATAAACAAGCAAATCTTAGAGAAAATTCACAACTTGCTATCT TAAAAGCCGCTAAATTAAAATTTGACTTTAGTGAAGATAAAATATCAACTCTAAGAAGCGAAAACAACAAAAGTTTAGAG CAATTTGAGCAAAATTTTAATATAGGAAATTTTGATATTTTTTTACAAAAATATTTTCAAAATGTAAAAATTCAAGAAAC TAAGCCCGAAAAACAAGAAAAATATCTAAAAAACCGCTTAGCCATTAAAGCGACAATGAACAATCCTAGAAGGCTTTATG ATTTTATTGATGCTCTAAAAAACTATAATAACTTAATCAAGCTTGATTATCCACTTAATCTTAAAGCAGGAGAGCAAGGT ATCTCTATAGATCTTACTCTCAAAGTTTATTCAAGCTAA
Upstream 100 bases:
>100_bases TTAAAAAGCATCTTTGATCAAAGCTATACAATCTATTATCGCTTAGATAATGGGTGGTATCGTTTTGTTAGTATTAGTAA ACAAATTCCAGGAGTTGCAG
Downstream 100 bases:
>100_bases ACTCACATCTTCGCCTTTTAAAATTTGATTCATAGTATTCATTGCACACATTTTTCCACACATGGAACATGAGTTTAAAT CATCAGGGCGACGCTCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKDKSLEEIDLLKLIICALSFISVCTALILFLLLPTLKNYKQANLRENSQLAILKAAKLKFDFSEDKISTLRSENNKSLE QFEQNFNIGNFDIFLQKYFQNVKIQETKPEKQEKYLKNRLAIKATMNNPRRLYDFIDALKNYNNLIKLDYPLNLKAGEQG ISIDLTLKVYSS
Sequences:
>Translated_172_residues MKDKSLEEIDLLKLIICALSFISVCTALILFLLLPTLKNYKQANLRENSQLAILKAAKLKFDFSEDKISTLRSENNKSLE QFEQNFNIGNFDIFLQKYFQNVKIQETKPEKQEKYLKNRLAIKATMNNPRRLYDFIDALKNYNNLIKLDYPLNLKAGEQG ISIDLTLKVYSS >Mature_172_residues MKDKSLEEIDLLKLIICALSFISVCTALILFLLLPTLKNYKQANLRENSQLAILKAAKLKFDFSEDKISTLRSENNKSLE QFEQNFNIGNFDIFLQKYFQNVKIQETKPEKQEKYLKNRLAIKATMNNPRRLYDFIDALKNYNNLIKLDYPLNLKAGEQG ISIDLTLKVYSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20007; Mature: 20007
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKSLEEIDLLKLIICALSFISVCTALILFLLLPTLKNYKQANLRENSQLAILKAAKLK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHEE FDFSEDKISTLRSENNKSLEQFEQNFNIGNFDIFLQKYFQNVKIQETKPEKQEKYLKNRL CCCCHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AIKATMNNPRRLYDFIDALKNYNNLIKLDYPLNLKAGEQGISIDLTLKVYSS EEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MKDKSLEEIDLLKLIICALSFISVCTALILFLLLPTLKNYKQANLRENSQLAILKAAKLK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHEE FDFSEDKISTLRSENNKSLEQFEQNFNIGNFDIFLQKYFQNVKIQETKPEKQEKYLKNRL CCCCHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AIKATMNNPRRLYDFIDALKNYNNLIKLDYPLNLKAGEQGISIDLTLKVYSS EEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA