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The map label for this gene is rpe [H]

Identifier: 57237505

GI number: 57237505

Start: 455142

End: 455789

Strand: Direct

Name: rpe [H]

Synonym: CJE0501

Alternate gene names: 57237505

Gene position: 455142-455789 (Clockwise)

Preceding gene: 57237501

Following gene: 57237506

Centisome position: 25.6

GC content: 31.48

Gene sequence:

>648_bases
ATGTATGTAGCTCCAAGTTTATTGTCTGCAAATTTTTTGAAATTAGAAGAAGAAGTTAAAGCTATTGAAGCTGCAGGTGC
AGATCTTTTGCATATTGATGTAATGGATGGACACTTTGTTCCAAATTTGACTTTCGGACCTTGCGTGATCGAAAAAATTT
CAACTATTAGTAAGTTGCCATTAGATGTGCATTTGATGGTTAAAGATGTAAGTAAATTTATAGATCTTTTTATCCCTTTG
AAACCAAAATTCATTTCTTTTCATATGGAAAGCGAAGTTCATCCTATAAGGCTTTGTGAATATATAAGAAGTCAAGGAAT
CCATCCTGCTATTGTTTTAAATCCACACACTCCTATTGATTCTATTAAACACATGCTAGAATTTGTAGATATGGTGCTTT
TAATGAGTGTTAATCCTGGATTTGGTGGACAAAAATTTTTACCTTTGGTACATGAAAAAATCAAAGAATTACGCCAAATG
ATTGATAAAAAAAATGCTAAAGTTTTTATAGAGGTTGATGGTGGTGTTAATGGTTTAAATGCTAGCGATTTAGAGGAATC
CGGAGCTGATATTTTGGTGGCTGGAAGTTATATTTTTTCTTCTAATGATTATAAAACTGCAATTTCATCTTTAAAGCTTG
AATTTTGA

Upstream 100 bases:

>100_bases
CAAAATTAAGCTTAAAATATTCCATAATTTATAGTTTTTTTAATATATAAGTCGATAAAATATTATTTATCACATTTATA
TATAGTTTAAGGTTTTGATC

Downstream 100 bases:

>100_bases
GTTTACAGCAAATTGATCAGATTATTTCTATATTAAACAAGCAAAGCAAGCCTTATGATTGGGTGATGCAAGAGTTTGCC
AAAGTTGAAGAATTAAAAAA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLPLDVHLMVKDVSKFIDLFIPL
KPKFISFHMESEVHPIRLCEYIRSQGIHPAIVLNPHTPIDSIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQM
IDKKNAKVFIEVDGGVNGLNASDLEESGADILVAGSYIFSSNDYKTAISSLKLEF

Sequences:

>Translated_215_residues
MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLPLDVHLMVKDVSKFIDLFIPL
KPKFISFHMESEVHPIRLCEYIRSQGIHPAIVLNPHTPIDSIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQM
IDKKNAKVFIEVDGGVNGLNASDLEESGADILVAGSYIFSSNDYKTAISSLKLEF
>Mature_215_residues
MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLPLDVHLMVKDVSKFIDLFIPL
KPKFISFHMESEVHPIRLCEYIRSQGIHPAIVLNPHTPIDSIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQM
IDKKNAKVFIEVDGGVNGLNASDLEESGADILVAGSYIFSSNDYKTAISSLKLEF

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=212, Percent_Identity=34.9056603773585, Blast_Score=132, Evalue=3e-31,
Organism=Homo sapiens, GI219879828, Length=212, Percent_Identity=33.4905660377358, Blast_Score=125, Evalue=3e-29,
Organism=Homo sapiens, GI24307923, Length=168, Percent_Identity=27.9761904761905, Blast_Score=74, Evalue=9e-14,
Organism=Escherichia coli, GI1789788, Length=214, Percent_Identity=42.9906542056075, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1790523, Length=197, Percent_Identity=35.5329949238579, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI1790754, Length=211, Percent_Identity=30.3317535545024, Blast_Score=113, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17552948, Length=216, Percent_Identity=37.037037037037, Blast_Score=141, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6322341, Length=225, Percent_Identity=36.4444444444444, Blast_Score=145, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24586301, Length=211, Percent_Identity=33.175355450237, Blast_Score=126, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23916; Mature: 23916

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLP
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCC
LDVHLMVKDVSKFIDLFIPLKPKFISFHMESEVHPIRLCEYIRSQGIHPAIVLNPHTPID
CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCHH
SIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDKKNAKVFIEVDGGVNGLN
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
ASDLEESGADILVAGSYIFSSNDYKTAISSLKLEF
CCCHHHCCCCEEEEEEEEEECCCHHHHHHHHCCCC
>Mature Secondary Structure
MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLP
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCC
LDVHLMVKDVSKFIDLFIPLKPKFISFHMESEVHPIRLCEYIRSQGIHPAIVLNPHTPID
CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCHH
SIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDKKNAKVFIEVDGGVNGLN
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
ASDLEESGADILVAGSYIFSSNDYKTAISSLKLEF
CCCHHHCCCCEEEEEEEEEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]