Click here to switch to the map view.

The map label for this gene is ykpA [H]

Identifier: 57237481

GI number: 57237481

Start: 426676

End: 428253

Strand: Direct

Name: ykpA [H]

Synonym: CJE0475

Alternate gene names: 57237481

Gene position: 426676-428253 (Clockwise)

Preceding gene: 57237480

Following gene: 57237482

Centisome position: 24.0

GC content: 34.16

Gene sequence:

>1578_bases
ATGGTTGAAGTAAAAAATCTTACTATGCGTTTTGCAAATCAGCTTTTATTTGAAAATGTTAATTTAAAACTTGTTCGAGG
ACAAAGATACGGACTTATCGGTGCTAATGGTGCGGGAAAATCGACTTTTTTGAAAATTCTTTCAGGAGAAATTGAGTCGA
GTAGTGGTGAAATAGTATTTGATGAAGGTTTAAAAATCGCAGTTTTAGGACAGGATCAATTTGCTTTTGAAAACTACACC
ATCAAAGATGCAGTGATGTGTGCAAATAAGCGTTTATATGAGGCCTTAAAAGAAAAAGAAAAGCTTTATATGAGCGAGGA
ATTTACAGATGAGATCAATGAGCGTTTAGGTGAGCTTGAGATAATAACGGCTGAAGAAGATCCAAATTATGATTGTGAAA
CGCGTTGTGAAAAAATTTTAAGTTCTTTAAAGATTAAAGATTTTGATGCTTTGATGAGCACCTTGCAAAGTGCGGATAAA
TTTAAAGTCTTACTAGCTCAAGTTTTGTTTTTGGGTGCGGATGTGCTTTTTTTAGATGAGCCTACAAATAACCTTGATTT
AGAGGCGATTTTTTGGCTTGAAAATGAGCTTTTAAGACATGAAGGAACTTTGGTTGTTATCTCTCATGATAGACATTTTT
TAAATAAAATTTGCACAAGGATTTTAGATGTGGATTTTAAACAAATTCGTGATTTTGCGGGAAATTACGATGATTGGTAT
ATGGCTTCAACGCTTTTGGCAAAACAAGCTGAGCTTAAACGTGATAAAACCTTAAAAGAAAGAGAAGAATTAGAAAATTT
CATTCGCCGTTTTAGCGCAAATGCTTCTAAGGCAAAACAAGCCACAAGCCGTGCTAAGGCACTTGAAAAACTAGAGCTTG
AAGAGATTAAAATTTCAAGCCGTAGAGATCCTAGCATAGTTTTTAGAACCAATCGTGAAATAGGTAATGAAGTTTTAGAA
TTTAAAGGTATAGGCAAGGCTTATGATAAACAATTGTTTTCAAATTTGGAGCTAAAAATAGAAAAAAATGATAAAATCGC
TTTGATCGGGGCAAATGGTGTGGGCAAAAGTACTTTGGCAAAAATCATCGCCAATGCTATAAATCCAGATAGTGGATCTA
TACATCTTGGGGCAACTATAGAGCTTGGATATTTTCCTCAAGATGCAAGTAATTTAATTTGTGAAAATTTGAAACTTTAT
GAATGGCTGATGAGTGAAAAATTTAAAGATCTAGATGAAATCCGCAAGTGTTTAGGTAGAATGCTTTTTAGTGGCAGCGA
TCAAGAAAAAATGGCAGCAAGTTTAAGTGGGGGTGAAAAACATCGTTTAATGCTTTCTCGTTTAATGCTAGAGCGTCCGA
ATTTCTTGCTTTTAGACGAACCTGATAACCATTTAGATCTTGAAAGTATTATTGCATTAGGTGAAGCTTTGTATAATTTC
AAAGGTGTAGTGCTTTGTATCAGCCACGATAGGGAGTTAGTTTCTGCTTTTGCTAATAGAATTTGGCATTTAGAAAATGG
TAAGCTTACAGATTTTCGTGGAACTTATCAAGAATTTTTAGGAGAAAATGATGGCTAA

Upstream 100 bases:

>100_bases
ATTTTCATTGTCTATATAAAATTTATACTTAATTAATTTCAAGTCTTTTTTTGATACAATTTCTTAAAAATTTTTATAAG
TAAAAAATTTAAGGAAAATC

Downstream 100 bases:

>100_bases
ATTTAGAATTCAATACAGCGCAGGTTTTGGGCACTATACGCAAAATCACAAGGGTTTTGGGCCTACGATTTATATAGAAG
AAGTCGTAGAGTTTGATAAT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFLKILSGEIESSSGEIVFDEGLKIAVLGQDQFAFENYT
IKDAVMCANKRLYEALKEKEKLYMSEEFTDEINERLGELEIITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADK
FKVLLAQVLFLGADVLFLDEPTNNLDLEAIFWLENELLRHEGTLVVISHDRHFLNKICTRILDVDFKQIRDFAGNYDDWY
MASTLLAKQAELKRDKTLKEREELENFIRRFSANASKAKQATSRAKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLE
FKGIGKAYDKQLFSNLELKIEKNDKIALIGANGVGKSTLAKIIANAINPDSGSIHLGATIELGYFPQDASNLICENLKLY
EWLMSEKFKDLDEIRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLMLERPNFLLLDEPDNHLDLESIIALGEALYNF
KGVVLCISHDRELVSAFANRIWHLENGKLTDFRGTYQEFLGENDG

Sequences:

>Translated_525_residues
MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFLKILSGEIESSSGEIVFDEGLKIAVLGQDQFAFENYT
IKDAVMCANKRLYEALKEKEKLYMSEEFTDEINERLGELEIITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADK
FKVLLAQVLFLGADVLFLDEPTNNLDLEAIFWLENELLRHEGTLVVISHDRHFLNKICTRILDVDFKQIRDFAGNYDDWY
MASTLLAKQAELKRDKTLKEREELENFIRRFSANASKAKQATSRAKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLE
FKGIGKAYDKQLFSNLELKIEKNDKIALIGANGVGKSTLAKIIANAINPDSGSIHLGATIELGYFPQDASNLICENLKLY
EWLMSEKFKDLDEIRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLMLERPNFLLLDEPDNHLDLESIIALGEALYNF
KGVVLCISHDRELVSAFANRIWHLENGKLTDFRGTYQEFLGENDG
>Mature_525_residues
MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFLKILSGEIESSSGEIVFDEGLKIAVLGQDQFAFENYT
IKDAVMCANKRLYEALKEKEKLYMSEEFTDEINERLGELEIITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADK
FKVLLAQVLFLGADVLFLDEPTNNLDLEAIFWLENELLRHEGTLVVISHDRHFLNKICTRILDVDFKQIRDFAGNYDDWY
MASTLLAKQAELKRDKTLKEREELENFIRRFSANASKAKQATSRAKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLE
FKGIGKAYDKQLFSNLELKIEKNDKIALIGANGVGKSTLAKIIANAINPDSGSIHLGATIELGYFPQDASNLICENLKLY
EWLMSEKFKDLDEIRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLMLERPNFLLLDEPDNHLDLESIIALGEALYNF
KGVVLCISHDRELVSAFANRIWHLENGKLTDFRGTYQEFLGENDG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=533, Percent_Identity=31.8949343339587, Blast_Score=245, Evalue=1e-64,
Organism=Homo sapiens, GI27881506, Length=545, Percent_Identity=31.9266055045872, Blast_Score=243, Evalue=2e-64,
Organism=Homo sapiens, GI10947137, Length=545, Percent_Identity=31.9266055045872, Blast_Score=243, Evalue=3e-64,
Organism=Homo sapiens, GI69354671, Length=532, Percent_Identity=29.6992481203008, Blast_Score=200, Evalue=4e-51,
Organism=Homo sapiens, GI10947135, Length=532, Percent_Identity=29.8872180451128, Blast_Score=199, Evalue=4e-51,
Organism=Escherichia coli, GI1787041, Length=525, Percent_Identity=42.4761904761905, Blast_Score=445, Evalue=1e-126,
Organism=Escherichia coli, GI1789751, Length=534, Percent_Identity=33.3333333333333, Blast_Score=270, Evalue=2e-73,
Organism=Escherichia coli, GI2367384, Length=519, Percent_Identity=33.140655105973, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI1787182, Length=556, Percent_Identity=30.9352517985612, Blast_Score=220, Evalue=2e-58,
Organism=Escherichia coli, GI48995001, Length=547, Percent_Identity=23.9488117001828, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1788165, Length=181, Percent_Identity=29.2817679558011, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081791, Length=225, Percent_Identity=28.4444444444444, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787164, Length=206, Percent_Identity=28.1553398058252, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=25.3164556962025, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789593, Length=225, Percent_Identity=28, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790525, Length=211, Percent_Identity=28.436018957346, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI87081709, Length=186, Percent_Identity=26.3440860215054, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1788897, Length=203, Percent_Identity=26.1083743842365, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081782, Length=193, Percent_Identity=31.6062176165803, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788540, Length=213, Percent_Identity=27.6995305164319, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786698, Length=196, Percent_Identity=27.0408163265306, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=529, Percent_Identity=31.0018903591682, Blast_Score=241, Evalue=5e-64,
Organism=Caenorhabditis elegans, GI17553372, Length=538, Percent_Identity=30.2973977695167, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI17559834, Length=550, Percent_Identity=29.2727272727273, Blast_Score=226, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI115533608, Length=216, Percent_Identity=27.7777777777778, Blast_Score=73, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6320874, Length=533, Percent_Identity=32.4577861163227, Blast_Score=242, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6321121, Length=534, Percent_Identity=31.2734082397004, Blast_Score=222, Evalue=1e-58,
Organism=Saccharomyces cerevisiae, GI6325030, Length=392, Percent_Identity=24.4897959183673, Blast_Score=110, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6323278, Length=384, Percent_Identity=25.78125, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=385, Percent_Identity=24.9350649350649, Blast_Score=106, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24666836, Length=537, Percent_Identity=31.6573556797021, Blast_Score=248, Evalue=6e-66,
Organism=Drosophila melanogaster, GI24642252, Length=534, Percent_Identity=32.3970037453184, Blast_Score=244, Evalue=2e-64,
Organism=Drosophila melanogaster, GI18859989, Length=534, Percent_Identity=32.3970037453184, Blast_Score=244, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24641342, Length=548, Percent_Identity=29.3795620437956, Blast_Score=218, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59709; Mature: 59709

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFLKILSGEIESSSGEIVF
CCCHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEE
DEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYEALKEKEKLYMSEEFTDEINERLGELE
ECCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
IITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADKFKVLLAQVLFLGADVLFLDE
EEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
PTNNLDLEAIFWLENELLRHEGTLVVISHDRHFLNKICTRILDVDFKQIRDFAGNYDDWY
CCCCCCEEEEEEHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHH
MASTLLAKQAELKRDKTLKEREELENFIRRFSANASKAKQATSRAKALEKLELEEIKISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RRDPSIVFRTNREIGNEVLEFKGIGKAYDKQLFSNLELKIEKNDKIALIGANGVGKSTLA
CCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCEEEEEECCCCCHHHHH
KIIANAINPDSGSIHLGATIELGYFPQDASNLICENLKLYEWLMSEKFKDLDEIRKCLGR
HHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
MLFSGSDQEKMAASLSGGEKHRLMLSRLMLERPNFLLLDEPDNHLDLESIIALGEALYNF
HHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCC
KGVVLCISHDRELVSAFANRIWHLENGKLTDFRGTYQEFLGENDG
CCEEEEEECCHHHHHHHHHHEEECCCCCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFLKILSGEIESSSGEIVF
CCCHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEE
DEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYEALKEKEKLYMSEEFTDEINERLGELE
ECCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
IITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADKFKVLLAQVLFLGADVLFLDE
EEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
PTNNLDLEAIFWLENELLRHEGTLVVISHDRHFLNKICTRILDVDFKQIRDFAGNYDDWY
CCCCCCEEEEEEHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHH
MASTLLAKQAELKRDKTLKEREELENFIRRFSANASKAKQATSRAKALEKLELEEIKISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RRDPSIVFRTNREIGNEVLEFKGIGKAYDKQLFSNLELKIEKNDKIALIGANGVGKSTLA
CCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCEEEEEECCCCCHHHHH
KIIANAINPDSGSIHLGATIELGYFPQDASNLICENLKLYEWLMSEKFKDLDEIRKCLGR
HHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
MLFSGSDQEKMAASLSGGEKHRLMLSRLMLERPNFLLLDEPDNHLDLESIIALGEALYNF
HHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCC
KGVVLCISHDRELVSAFANRIWHLENGKLTDFRGTYQEFLGENDG
CCEEEEEECCHHHHHHHHHHEEECCCCCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]