Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

Click here to switch to the map view.

The map label for this gene is yceI [C]

Identifier: 57237475

GI number: 57237475

Start: 423328

End: 423900

Strand: Direct

Name: yceI [C]

Synonym: CJE0469

Alternate gene names: 57237475

Gene position: 423328-423900 (Clockwise)

Preceding gene: 57237474

Following gene: 57237478

Centisome position: 23.81

GC content: 28.8

Gene sequence:

>573_bases
ATGAAAAAAGTTTTATTGAGTTCATTGGTTGCGGTGTCTTTGTTAAGCACAGGTTTGTTTGCTAAAGAATATACTTTAGA
TAAAGCACATACAGATGTAGGTTTTAAAATCAAACATTTACAAATTAGCAATGTAAAAGGAAATTTCAAAGATTATTCTG
CGGTGATTGATTTTGATCCTGCGAGTGCTGAATTTAAAAAGCTTGATGTAACTATAAAAATCGCATCTGTAAATACAGAA
AATCAAACAAGAGATAATCACTTACAACAAGATGATTTTTTCAAAGCAAAAAAATATCCTGATATGACTTTTACAATGAA
AAAATATGAAAAAATCGATAATGAAAAAGGCAAAATGACAGGAACTTTAACTATAGCTGGAGTTTCTAAAGATATCGTTT
TAGATGCTGAAATCGGCGGTGTAGCTAAAGGCAAAGATGGAAAAGAAAAAATAGGATTTTCTTTAAATGGAAAAATCAAA
CGCTCTGATTTTAAATTTGCAACAAGTACTTCAACTATTACTTTAAGTGATGATATTAATTTAAATATCGAAGTTGAAGC
GAACGAAAAATAA

Upstream 100 bases:

>100_bases
AAATTTTTAAATAGTAAAATTTTTTGATTTTTATTAATGATTTGTTATGTTTTATCTAATAAAATTTTTATATTGAAAAT
TACTATAAAAAAGGAAAAAA

Downstream 100 bases:

>100_bases
TTTTTTAGTCTAAGAGTCTTGCTCTTAGACTTTGTAAATTTTTATCCAAATTTTCTTCACTTTCTTGCCAAATCAATTTA
AAATCCGGTTTAAAATTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKKVLLSSLVAVSLLSTGLFAKEYTLDKAHTDVGFKIKHLQISNVKGNFKDYSAVIDFDPASAEFKKLDVTIKIASVNTE
NQTRDNHLQQDDFFKAKKYPDMTFTMKKYEKIDNEKGKMTGTLTIAGVSKDIVLDAEIGGVAKGKDGKEKIGFSLNGKIK
RSDFKFATSTSTITLSDDINLNIEVEANEK

Sequences:

>Translated_190_residues
MKKVLLSSLVAVSLLSTGLFAKEYTLDKAHTDVGFKIKHLQISNVKGNFKDYSAVIDFDPASAEFKKLDVTIKIASVNTE
NQTRDNHLQQDDFFKAKKYPDMTFTMKKYEKIDNEKGKMTGTLTIAGVSKDIVLDAEIGGVAKGKDGKEKIGFSLNGKIK
RSDFKFATSTSTITLSDDINLNIEVEANEK
>Mature_190_residues
MKKVLLSSLVAVSLLSTGLFAKEYTLDKAHTDVGFKIKHLQISNVKGNFKDYSAVIDFDPASAEFKKLDVTIKIASVNTE
NQTRDNHLQQDDFFKAKKYPDMTFTMKKYEKIDNEKGKMTGTLTIAGVSKDIVLDAEIGGVAKGKDGKEKIGFSLNGKIK
RSDFKFATSTSTITLSDDINLNIEVEANEK

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787295, Length=193, Percent_Identity=36.7875647668394, Blast_Score=107, Evalue=6e-25,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 21038; Mature: 21038

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLLSSLVAVSLLSTGLFAKEYTLDKAHTDVGFKIKHLQISNVKGNFKDYSAVIDFDP
CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECC
ASAEFKKLDVTIKIASVNTENQTRDNHLQQDDFFKAKKYPDMTFTMKKYEKIDNEKGKMT
CCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCEEEEHHHHHHCCCCCCCEE
GTLTIAGVSKDIVLDAEIGGVAKGKDGKEKIGFSLNGKIKRSDFKFATSTSTITLSDDIN
EEEEEEECCCEEEEEECCCCEECCCCCHHHCCEEECCEEEECCEEEEECCEEEEEECCCE
LNIEVEANEK
EEEEEEECCC
>Mature Secondary Structure
MKKVLLSSLVAVSLLSTGLFAKEYTLDKAHTDVGFKIKHLQISNVKGNFKDYSAVIDFDP
CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECC
ASAEFKKLDVTIKIASVNTENQTRDNHLQQDDFFKAKKYPDMTFTMKKYEKIDNEKGKMT
CCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCEEEEHHHHHHCCCCCCCEE
GTLTIAGVSKDIVLDAEIGGVAKGKDGKEKIGFSLNGKIKRSDFKFATSTSTITLSDDIN
EEEEEEECCCEEEEEECCCCEECCCCCHHHCCEEECCEEEECCEEEEECCEEEEEECCCE
LNIEVEANEK
EEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]