| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is hcpE [H]
Identifier: 57237468
GI number: 57237468
Start: 417781
End: 418485
Strand: Direct
Name: hcpE [H]
Synonym: CJE0462
Alternate gene names: 57237468
Gene position: 417781-418485 (Clockwise)
Preceding gene: 57237467
Following gene: 57237469
Centisome position: 23.5
GC content: 27.52
Gene sequence:
>705_bases ATGAGAATATTTTTAGCTTTATTTTTATTTTTTAATTCATTACTTGCATTAAGTGAATTAGAAGAAGGTTTAAAATTTTA TGAAGCAAATAAATTTGATAAAGCTTATGAAATTTTTAAAAGCCTTTGTGAAAAAGATATTTCTAAAGCTTGTTTTTCTT TAGCTTTTATGTACGAAAGTGCTAAGGGTATGAGTAAGGATTTAAATCAAGCTTATAAATTTTATGATAAAGCTTGCAAA TTAGGTTTAGCAAGTGCGTGTTCTAATATGGCTTTGCTTTTGCAAAATCAAGGTTATAAAAATGAAGCTCTTTTGGCTTT TAATAAAGCTTGTACTTTAGGAGAATCGTTAAGTTGTAATAATATAGCTTTATTTTATGAAAAAGAAAAAGATGGACAAA TGGCCTCAAGTTTTTATAAAAGATCTTGTGATTTAAAAAATGCAAGAGCTTGTTATCAATTAGGGTCTTTATATGATAAA GGAGAGCTTGTTAAAGCAAGTGTAAAATCTGCCCTTGCTTTTTATTCTAAATCTTGCACTTTAGGTTTTGGTGAGTCTTG TTATTTGTTAGGACGCTATAATCAACTAGAAAAACAAGATTTAACAAAGGCAAAAAGATATTTTGGTATGGCTTGTGATC AAAAACATCAAGAAGCTTGTGCAGCTTATAAAGAACTTAATTCTAAAGATATAGAGCTTTATTAA
Upstream 100 bases:
>100_bases TAATCCAAGAAAAAAGTAAATTTTTAGATCTTAAAAAAGCAGAACTTCGAAAAAGAAGAGTACAGATTTTAAATGTTAGA GAAAGTATAAAGGAAGATTG
Downstream 100 bases:
>100_bases AAGTTCTATTTTCATTACTTTCAAAGATATTCTTAAATAAAATTAAGAATAACACAAAATTTATCGCTTTTTAAAGTTAA ATTTATATTAATAGGGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Cysteine-rich protein E [H]
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MRIFLALFLFFNSLLALSELEEGLKFYEANKFDKAYEIFKSLCEKDISKACFSLAFMYESAKGMSKDLNQAYKFYDKACK LGLASACSNMALLLQNQGYKNEALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDK GELVKASVKSALAFYSKSCTLGFGESCYLLGRYNQLEKQDLTKAKRYFGMACDQKHQEACAAYKELNSKDIELY
Sequences:
>Translated_234_residues MRIFLALFLFFNSLLALSELEEGLKFYEANKFDKAYEIFKSLCEKDISKACFSLAFMYESAKGMSKDLNQAYKFYDKACK LGLASACSNMALLLQNQGYKNEALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDK GELVKASVKSALAFYSKSCTLGFGESCYLLGRYNQLEKQDLTKAKRYFGMACDQKHQEACAAYKELNSKDIELY >Mature_234_residues MRIFLALFLFFNSLLALSELEEGLKFYEANKFDKAYEIFKSLCEKDISKACFSLAFMYESAKGMSKDLNQAYKFYDKACK LGLASACSNMALLLQNQGYKNEALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDK GELVKASVKSALAFYSKSCTLGFGESCYLLGRYNQLEKQDLTKAKRYFGMACDQKHQEACAAYKELNSKDIELY
Specific function: May hydrolyze 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives [H]
COG id: COG0790
COG function: function code R; FOG: TPR repeat, SEL1 subfamily
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006597 - InterPro: IPR011990 [H]
Pfam domain/function: PF08238 Sel1 [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 26490; Mature: 26490
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFLALFLFFNSLLALSELEEGLKFYEANKFDKAYEIFKSLCEKDISKACFSLAFMYES CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKGMSKDLNQAYKFYDKACKLGLASACSNMALLLQNQGYKNEALLAFNKACTLGESLSCN HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC NIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDKGELVKASVKSALAFYSKSCT CEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC LGFGESCYLLGRYNQLEKQDLTKAKRYFGMACDQKHQEACAAYKELNSKDIELY CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRIFLALFLFFNSLLALSELEEGLKFYEANKFDKAYEIFKSLCEKDISKACFSLAFMYES CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKGMSKDLNQAYKFYDKACKLGLASACSNMALLLQNQGYKNEALLAFNKACTLGESLSCN HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC NIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDKGELVKASVKSALAFYSKSCT CEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC LGFGESCYLLGRYNQLEKQDLTKAKRYFGMACDQKHQEACAAYKELNSKDIELY CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]