Click here to switch to the map view.

The map label for this gene is 57237280

Identifier: 57237280

GI number: 57237280

Start: 240090

End: 242162

Strand: Reverse

Name: 57237280

Synonym: CJE0270

Alternate gene names: NA

Gene position: 242162-240090 (Counterclockwise)

Preceding gene: 57237281

Following gene: 57237279

Centisome position: 13.62

GC content: 32.37

Gene sequence:

>2073_bases
GTGTATTTCTTAGAAACCAAAGAAGCTGCACAAGCTTTTAATGTAAGCACAGGTGCTTTGAGACTTGCAGCAAGTAGAAA
CTCAAATAAATACGAGTGGTTAAAAGTAGATAATGAAAAAGGCGGCAGGGGTGGCAAAAAACTACTATTTAAAATAAGCA
AAGATAAGCTTTTAACCGCCTTTAACCAAGAATTAATCACTAAAAATACTTTAATTTATGATGAAAAAATGCAAAAAGTT
AAATTGAGCGAAATTATTACTACCGATAATTTAAAAACTATAAATAATAGTTTAAAAACTAGTAATTTAAATTTAACAGA
GTCAAAAATAAATGATGATTTGGCTGTTTTAAATTTAAAATTTGAAAATTTAAGCGATGAACTTAAAGAAGATGCGAAAA
GTAAAGTAAAATTACTTAAACAAGTAGAAAAATATATTGAAGGTGGTCTTACACTCAAAAGAGCATTGTTTTTATGTAAT
GTAGAATGGAGAAATTATTCTAACTGGCGTTCAGACTATAAAAAGTATGGCATTCTAGGCTTAGTCGACACTCGCGGACT
TCACCGCAAAGATAAAACTAAACTTAGTGCTTGGATGCAAGAATATGCCTTAAGAGAGTATCGCACCTTTGGAGCAGGTG
GATTTAATTTCACTGAGCTTTGGTGGCAAATTCATAAAGAAGCAGCTACTAAAGAAAATTATGACTTTATAGGTTTTGAC
TTAGGGGAAGTAAAGCCACTCTTTAGTGTAAAAACCTTGCAAAACTTTATTAAAAACTACTACAAAGATAAACCATTAGA
ACATTGCATTATTACTCAAGGCTTAGATCGTGCAAAATCTAAGTTTCTCCCTGCACAAGGAAATCAAAGAGAGCTATATG
ACATGAAAAACATGTGTTGGCAAATCGATAGTTCCCCAGCTGATATTATAGTAAGAGATGATGAAACCTTAGAGCCTTTC
CGCCCTCATATCTTAAGTGTCGTTGATGTCTTTAGCGGTATGGGTGTGGCTACTTTAGTAAGTAAATCAAATTCTTTAAG
TTTGACGCGTCTTTTATGGAAAGCTATAGATAAGTTTGGTAAGCCTGATATGATTAAAGGGGATAATGGAAAAGATTATC
TTTCTAAAGATTTTCAAAGCTTGCTTGATGGGCTTAATATTACCTATGATGCAGCTATTGCTTATGCAGGAGAACAAAAA
GCTTTAGTTGAAAGACGCTTTGGGACACTTCAACATGCAGGAATTTCTAAAATGCATGGACATATTGGCAATAATCTTGC
CAAAAGAGAAATGATAGAGCAAAAAACTCCTAAAAAAGATAGACGTGCTAAAGATGAATACGGCTTTGCTAAAAAAACTA
ATCAAAAATTACTTCTTACCTTTAGCGAAGCTTGTGAGTTTTTAGAAGCTGAAGTGATTAAATGGAACATGAGCAAAGTT
CGTCGTAAAAAAGGCATTAAAACTCCACTTGAGCTTTGGAACTCGTGCGATAGAGCTATTGTAAAAATCTCTTATGAAGA
ATTTTTGTTTAACGCTGGAAATAAAGAACTTAGGGTCGTGGGTAAAAAAGGCATTAACTTTGAAAGTAGAGTTTATAAAA
GTGCTTTAATGCCAAGTGTTGGCACAAAAGTTAAATGTGTACAAAATATCGATAATATTAAAGAGCTTTTCATTTATGAT
TTAAGCGGAAACTTCCTTTGTCTAGCACTTGATGAAAGTATCGCTAAACTTAGTAAAGAAAGCTATAAAATGCTTAAAAA
AGGTTATGAAAGTGAAGTTAAAGCGATTAAAGAAGTGCTTAAAAAAGATGAGATTGCCGTCTTTACTAAACTTAATATTA
AACAAGACTTACAAGATTTACAAAGTGCTTTTGAAAACTCACTCGTAGAAGCTAAAGAGGTGCATCAAAAATCCCTTGCA
AAAGAAACTTTAAAAACTCAAAGAGAATTAGAAGAGATTAAAAACAATGCTAATGCGGATGAGCTTATTTTAAACGCTAA
AAAAGAAATAAATAACGATGAAAGCGAGTTTGACATGGAAGCTTTTGTCGAAAAGAAATATTTTGCTGGTTAA

Upstream 100 bases:

>100_bases
AAATTACAGGTGAAAGAAATACTAAGGGTAGTACAAAAGCGGTATTTAAAAAGCTCTTAGAGCTCGGCATCATTAATGAG
CTTCCGCAAGGATTAAAATA

Downstream 100 bases:

>100_bases
AAATTGTTTAAAGCTTGATTAATTCAAGTTTTAAAGAGTTTTTACTCATAAAAAACAAAAGGATAAAAAATGCAATTAGT
AGAACTTACTAAAAAGTTTT

Product: bacteriophage DNA transposition protein A

Products: NA

Alternate protein names: Integrase Catalytic Region; Transposase Protein A; Bacteriophage DNA Transposition Protein A; Integrase Catalytic Subunit; Prophage Mu DNA Transposition Protein A; Prophage; Prophage Mu Protein; Transposase-Like Mu; Bacteriophage DNA Transposase; Phage Transposase Protein A

Number of amino acids: Translated: 690; Mature: 690

Protein sequence:

>690_residues
MYFLETKEAAQAFNVSTGALRLAASRNSNKYEWLKVDNEKGGRGGKKLLFKISKDKLLTAFNQELITKNTLIYDEKMQKV
KLSEIITTDNLKTINNSLKTSNLNLTESKINDDLAVLNLKFENLSDELKEDAKSKVKLLKQVEKYIEGGLTLKRALFLCN
VEWRNYSNWRSDYKKYGILGLVDTRGLHRKDKTKLSAWMQEYALREYRTFGAGGFNFTELWWQIHKEAATKENYDFIGFD
LGEVKPLFSVKTLQNFIKNYYKDKPLEHCIITQGLDRAKSKFLPAQGNQRELYDMKNMCWQIDSSPADIIVRDDETLEPF
RPHILSVVDVFSGMGVATLVSKSNSLSLTRLLWKAIDKFGKPDMIKGDNGKDYLSKDFQSLLDGLNITYDAAIAYAGEQK
ALVERRFGTLQHAGISKMHGHIGNNLAKREMIEQKTPKKDRRAKDEYGFAKKTNQKLLLTFSEACEFLEAEVIKWNMSKV
RRKKGIKTPLELWNSCDRAIVKISYEEFLFNAGNKELRVVGKKGINFESRVYKSALMPSVGTKVKCVQNIDNIKELFIYD
LSGNFLCLALDESIAKLSKESYKMLKKGYESEVKAIKEVLKKDEIAVFTKLNIKQDLQDLQSAFENSLVEAKEVHQKSLA
KETLKTQRELEEIKNNANADELILNAKKEINNDESEFDMEAFVEKKYFAG

Sequences:

>Translated_690_residues
MYFLETKEAAQAFNVSTGALRLAASRNSNKYEWLKVDNEKGGRGGKKLLFKISKDKLLTAFNQELITKNTLIYDEKMQKV
KLSEIITTDNLKTINNSLKTSNLNLTESKINDDLAVLNLKFENLSDELKEDAKSKVKLLKQVEKYIEGGLTLKRALFLCN
VEWRNYSNWRSDYKKYGILGLVDTRGLHRKDKTKLSAWMQEYALREYRTFGAGGFNFTELWWQIHKEAATKENYDFIGFD
LGEVKPLFSVKTLQNFIKNYYKDKPLEHCIITQGLDRAKSKFLPAQGNQRELYDMKNMCWQIDSSPADIIVRDDETLEPF
RPHILSVVDVFSGMGVATLVSKSNSLSLTRLLWKAIDKFGKPDMIKGDNGKDYLSKDFQSLLDGLNITYDAAIAYAGEQK
ALVERRFGTLQHAGISKMHGHIGNNLAKREMIEQKTPKKDRRAKDEYGFAKKTNQKLLLTFSEACEFLEAEVIKWNMSKV
RRKKGIKTPLELWNSCDRAIVKISYEEFLFNAGNKELRVVGKKGINFESRVYKSALMPSVGTKVKCVQNIDNIKELFIYD
LSGNFLCLALDESIAKLSKESYKMLKKGYESEVKAIKEVLKKDEIAVFTKLNIKQDLQDLQSAFENSLVEAKEVHQKSLA
KETLKTQRELEEIKNNANADELILNAKKEINNDESEFDMEAFVEKKYFAG
>Mature_690_residues
MYFLETKEAAQAFNVSTGALRLAASRNSNKYEWLKVDNEKGGRGGKKLLFKISKDKLLTAFNQELITKNTLIYDEKMQKV
KLSEIITTDNLKTINNSLKTSNLNLTESKINDDLAVLNLKFENLSDELKEDAKSKVKLLKQVEKYIEGGLTLKRALFLCN
VEWRNYSNWRSDYKKYGILGLVDTRGLHRKDKTKLSAWMQEYALREYRTFGAGGFNFTELWWQIHKEAATKENYDFIGFD
LGEVKPLFSVKTLQNFIKNYYKDKPLEHCIITQGLDRAKSKFLPAQGNQRELYDMKNMCWQIDSSPADIIVRDDETLEPF
RPHILSVVDVFSGMGVATLVSKSNSLSLTRLLWKAIDKFGKPDMIKGDNGKDYLSKDFQSLLDGLNITYDAAIAYAGEQK
ALVERRFGTLQHAGISKMHGHIGNNLAKREMIEQKTPKKDRRAKDEYGFAKKTNQKLLLTFSEACEFLEAEVIKWNMSKV
RRKKGIKTPLELWNSCDRAIVKISYEEFLFNAGNKELRVVGKKGINFESRVYKSALMPSVGTKVKCVQNIDNIKELFIYD
LSGNFLCLALDESIAKLSKESYKMLKKGYESEVKAIKEVLKKDEIAVFTKLNIKQDLQDLQSAFENSLVEAKEVHQKSLA
KETLKTQRELEEIKNNANADELILNAKKEINNDESEFDMEAFVEKKYFAG

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79164; Mature: 79164

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFLETKEAAQAFNVSTGALRLAASRNSNKYEWLKVDNEKGGRGGKKLLFKISKDKLLTA
CCEECCHHHHHHHCCCHHHEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECHHHHHHH
FNQELITKNTLIYDEKMQKVKLSEIITTDNLKTINNSLKTSNLNLTESKINDDLAVLNLK
HHHHHHHCCCEEEHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHCCCCEEEEEEE
FENLSDELKEDAKSKVKLLKQVEKYIEGGLTLKRALFLCNVEWRNYSNWRSDYKKYGILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEE
LVDTRGLHRKDKTKLSAWMQEYALREYRTFGAGGFNFTELWWQIHKEAATKENYDFIGFD
EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEECC
LGEVKPLFSVKTLQNFIKNYYKDKPLEHCIITQGLDRAKSKFLPAQGNQRELYDMKNMCW
HHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHE
QIDSSPADIIVRDDETLEPFRPHILSVVDVFSGMGVATLVSKSNSLSLTRLLWKAIDKFG
ECCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHCC
KPDMIKGDNGKDYLSKDFQSLLDGLNITYDAAIAYAGEQKALVERRFGTLQHAGISKMHG
CCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHEEECCCHHHHHHHHHHHHHHCCHHHHHH
HIGNNLAKREMIEQKTPKKDRRAKDEYGFAKKTNQKLLLTFSEACEFLEAEVIKWNMSKV
HHCCHHHHHHHHHHCCCCHHHCCHHHCCCHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
RRKKGIKTPLELWNSCDRAIVKISYEEFLFNAGNKELRVVGKKGINFESRVYKSALMPSV
HHHCCCCCHHHHHHCCCHHEEEEEHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCC
GTKVKCVQNIDNIKELFIYDLSGNFLCLALDESIAKLSKESYKMLKKGYESEVKAIKEVL
CCHHHHHHHHHHHHHEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KKDEIAVFTKLNIKQDLQDLQSAFENSLVEAKEVHQKSLAKETLKTQRELEEIKNNANAD
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELILNAKKEINNDESEFDMEAFVEKKYFAG
HHHHCCHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYFLETKEAAQAFNVSTGALRLAASRNSNKYEWLKVDNEKGGRGGKKLLFKISKDKLLTA
CCEECCHHHHHHHCCCHHHEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECHHHHHHH
FNQELITKNTLIYDEKMQKVKLSEIITTDNLKTINNSLKTSNLNLTESKINDDLAVLNLK
HHHHHHHCCCEEEHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHCCCCEEEEEEE
FENLSDELKEDAKSKVKLLKQVEKYIEGGLTLKRALFLCNVEWRNYSNWRSDYKKYGILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEE
LVDTRGLHRKDKTKLSAWMQEYALREYRTFGAGGFNFTELWWQIHKEAATKENYDFIGFD
EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEECC
LGEVKPLFSVKTLQNFIKNYYKDKPLEHCIITQGLDRAKSKFLPAQGNQRELYDMKNMCW
HHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHE
QIDSSPADIIVRDDETLEPFRPHILSVVDVFSGMGVATLVSKSNSLSLTRLLWKAIDKFG
ECCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHCC
KPDMIKGDNGKDYLSKDFQSLLDGLNITYDAAIAYAGEQKALVERRFGTLQHAGISKMHG
CCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHEEECCCHHHHHHHHHHHHHHCCHHHHHH
HIGNNLAKREMIEQKTPKKDRRAKDEYGFAKKTNQKLLLTFSEACEFLEAEVIKWNMSKV
HHCCHHHHHHHHHHCCCCHHHCCHHHCCCHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
RRKKGIKTPLELWNSCDRAIVKISYEEFLFNAGNKELRVVGKKGINFESRVYKSALMPSV
HHHCCCCCHHHHHHCCCHHEEEEEHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCC
GTKVKCVQNIDNIKELFIYDLSGNFLCLALDESIAKLSKESYKMLKKGYESEVKAIKEVL
CCHHHHHHHHHHHHHEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KKDEIAVFTKLNIKQDLQDLQSAFENSLVEAKEVHQKSLAKETLKTQRELEEIKNNANAD
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELILNAKKEINNDESEFDMEAFVEKKYFAG
HHHHCCHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA