| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237259
Identifier: 57237259
GI number: 57237259
Start: 227105
End: 228688
Strand: Direct
Name: 57237259
Synonym: CJE0249
Alternate gene names: NA
Gene position: 227105-228688 (Clockwise)
Preceding gene: 57237258
Following gene: 57237260
Centisome position: 12.77
GC content: 32.77
Gene sequence:
>1584_bases ATGCAAAGAAAAGACTTTTTAGAATGGATGGATGAGCTAAAAAATGAATTAAAAACTCAATTTTTGCATGAAAGCCATTT AGATCCTACTTTAAAAGAAGAAAGAATTAAAAGAGCGAGTGTGGATTTTGATTATTTTGCAAGAACTTATTTTCCGCATT ATTTTACCATTAAAGGAGAATGTGGCTTACATTTGCACTTAAATGAAGTTTTTACAAAAATCGCACTTAAAAAAGAAAGT AAAGGTGAAAAACACGCCATAGCTGCACCAAGAGCTCATGGTAAATCCACCTACACTTCACAACTCTTTCCTTTGTGGTG CTTAGTTTTTAATTATAAAAGCTTTATAGTAGAGATTTCAGATGCGGTCGAACTTATGGAAGGAATGCTTGAAGCTATTA AAGCAGAGCTTGAAGATAATCCGCATTTAAAGCTTGATTTTCCCGAAGTAGTAGGAATTGGCAAGACTTGGCGCGTAGGA GAGTTTGTAAGTAATAATGGCGTAAAGATTAAAGCCTTTGGCAGTGGTAAAAGACTTCGTGGGGTTAGATATGGGGTTAA AAGACCTGATTTAGTTATTTTAGATGATTTAGAAAATGATACTAATGTCAGGAGTAAAGATCAAAGGGATAAATTAGAAG ATTGGGTGGATGAAGCGGTTTTAAACTTAGGGAGTGCGGATGGAAGCTTAGATGTGCTTTATATTGGAACCATTTTACAT AATGATAGCGTGTTATCTAGAAAATTAAAGCTTGGTTTTTGGAATCCTAAAGTCTTCCGTTCCATCGAAGAGTTTCCACA AAGGCTTGATTTATGGGATGAATACGCCATGCTTTATAGAAATGCTGATTTTAATACCGCTCATCAATTTTATTTAAAAA ATAAAGTTTTAATGGATAAAGGGGCAAAAGTTCTTTGGAAAGAAGCCAAAAGCTTAGAAGATTTAATGAAGTTAAGGGCT GAAAATCTAAAAGCTTTTAATAAAGAGCAACTCAATAATCCAAGAAGTGAAAATCAAATCTTTAGCCTTGATGGCATTAA TTTTTATGATGATTTACCTGCCATTAATCAGTATTATATGTATATTGACCCAGCAGGAGAAAAAGCAAAAAGTGACTTTA CTGCGATTACCATTATTGGCAAAGGTGCAAAGGGTTTTTATGTAGCAGAAAGCATCGTAAAAATCTTAAAAGCACAAAGC ATTATAAAAACCATTTTTAATCTTCAAAAGATTTATAAATGTCGCTTGATTGAAATTGAAACTAATGGCGGTCAATTTTT CTTAAAAAAATGGTTACAAGAAAAAAGCTTAGAAAGTGGAGTTTTTTTGCCTTTGCGTGGTAAAAATAATAGCGTTAGCA AGTTTGAACGCATTGAGAGTTTAAGCCTTGCTTTTGAAAATGAAGAGCTTTTTTTACATAAAAGCCAAACTATGCTTATA AATCAACTTTTAGAATTTCCAGAAGGGAAAAATGATGATGCACCTGATAGCTTAGCAGGAGCATTTTTATTAGCAAGAAC TAAAAGTAGCATTAAAAGAAGAAAGCATCATTTTAACTCTGTTTCAAGAATAAGGCGTTTTTAA
Upstream 100 bases:
>100_bases CAATGGATATTTAATGCTTTTTTCCAAAGAAGAACTCGATGAGTTTTTAATCTCAAACGAACAAAAGCACGAAAACACTC CAAATGAACTAAAAGGTGCT
Downstream 100 bases:
>100_bases AGGAAAAATATGAAAAAAGAAATCAAATCCAAAAGAGAAGTGATATTAAAAAACAATAGTCTTATAAACACTCTTATAAA CTCAAGCTATTTAAATGTGC
Product: phage uncharacterized protein
Products: NA
Alternate protein names: Phage Protein; Phage Protein C-Terminal
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MQRKDFLEWMDELKNELKTQFLHESHLDPTLKEERIKRASVDFDYFARTYFPHYFTIKGECGLHLHLNEVFTKIALKKES KGEKHAIAAPRAHGKSTYTSQLFPLWCLVFNYKSFIVEISDAVELMEGMLEAIKAELEDNPHLKLDFPEVVGIGKTWRVG EFVSNNGVKIKAFGSGKRLRGVRYGVKRPDLVILDDLENDTNVRSKDQRDKLEDWVDEAVLNLGSADGSLDVLYIGTILH NDSVLSRKLKLGFWNPKVFRSIEEFPQRLDLWDEYAMLYRNADFNTAHQFYLKNKVLMDKGAKVLWKEAKSLEDLMKLRA ENLKAFNKEQLNNPRSENQIFSLDGINFYDDLPAINQYYMYIDPAGEKAKSDFTAITIIGKGAKGFYVAESIVKILKAQS IIKTIFNLQKIYKCRLIEIETNGGQFFLKKWLQEKSLESGVFLPLRGKNNSVSKFERIESLSLAFENEELFLHKSQTMLI NQLLEFPEGKNDDAPDSLAGAFLLARTKSSIKRRKHHFNSVSRIRRF
Sequences:
>Translated_527_residues MQRKDFLEWMDELKNELKTQFLHESHLDPTLKEERIKRASVDFDYFARTYFPHYFTIKGECGLHLHLNEVFTKIALKKES KGEKHAIAAPRAHGKSTYTSQLFPLWCLVFNYKSFIVEISDAVELMEGMLEAIKAELEDNPHLKLDFPEVVGIGKTWRVG EFVSNNGVKIKAFGSGKRLRGVRYGVKRPDLVILDDLENDTNVRSKDQRDKLEDWVDEAVLNLGSADGSLDVLYIGTILH NDSVLSRKLKLGFWNPKVFRSIEEFPQRLDLWDEYAMLYRNADFNTAHQFYLKNKVLMDKGAKVLWKEAKSLEDLMKLRA ENLKAFNKEQLNNPRSENQIFSLDGINFYDDLPAINQYYMYIDPAGEKAKSDFTAITIIGKGAKGFYVAESIVKILKAQS IIKTIFNLQKIYKCRLIEIETNGGQFFLKKWLQEKSLESGVFLPLRGKNNSVSKFERIESLSLAFENEELFLHKSQTMLI NQLLEFPEGKNDDAPDSLAGAFLLARTKSSIKRRKHHFNSVSRIRRF >Mature_527_residues MQRKDFLEWMDELKNELKTQFLHESHLDPTLKEERIKRASVDFDYFARTYFPHYFTIKGECGLHLHLNEVFTKIALKKES KGEKHAIAAPRAHGKSTYTSQLFPLWCLVFNYKSFIVEISDAVELMEGMLEAIKAELEDNPHLKLDFPEVVGIGKTWRVG EFVSNNGVKIKAFGSGKRLRGVRYGVKRPDLVILDDLENDTNVRSKDQRDKLEDWVDEAVLNLGSADGSLDVLYIGTILH NDSVLSRKLKLGFWNPKVFRSIEEFPQRLDLWDEYAMLYRNADFNTAHQFYLKNKVLMDKGAKVLWKEAKSLEDLMKLRA ENLKAFNKEQLNNPRSENQIFSLDGINFYDDLPAINQYYMYIDPAGEKAKSDFTAITIIGKGAKGFYVAESIVKILKAQS IIKTIFNLQKIYKCRLIEIETNGGQFFLKKWLQEKSLESGVFLPLRGKNNSVSKFERIESLSLAFENEELFLHKSQTMLI NQLLEFPEGKNDDAPDSLAGAFLLARTKSSIKRRKHHFNSVSRIRRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60936; Mature: 60936
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRKDFLEWMDELKNELKTQFLHESHLDPTLKEERIKRASVDFDYFARTYFPHYFTIKGE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCEEEEEECC CGLHLHLNEVFTKIALKKESKGEKHAIAAPRAHGKSTYTSQLFPLWCLVFNYKSFIVEIS CCEEEEHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DAVELMEGMLEAIKAELEDNPHLKLDFPEVVGIGKTWRVGEFVSNNGVKIKAFGSGKRLR HHHHHHHHHHHHHHHHCCCCCCEEEECHHHHCCCCCCCCCHHHCCCCEEEEEECCCCCCC GVRYGVKRPDLVILDDLENDTNVRSKDQRDKLEDWVDEAVLNLGSADGSLDVLYIGTILH HHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECC NDSVLSRKLKLGFWNPKVFRSIEEFPQRLDLWDEYAMLYRNADFNTAHQFYLKNKVLMDK CCHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHCHHHHHC GAKVLWKEAKSLEDLMKLRAENLKAFNKEQLNNPRSENQIFSLDGINFYDDLPAINQYYM CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEECCCCHHCCCCCCCEEEE YIDPAGEKAKSDFTAITIIGKGAKGFYVAESIVKILKAQSIIKTIFNLQKIYKCRLIEIE EECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE TNGGQFFLKKWLQEKSLESGVFLPLRGKNNSVSKFERIESLSLAFENEELFLHKSQTMLI CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHEECCCEEEEECHHHHHH NQLLEFPEGKNDDAPDSLAGAFLLARTKSSIKRRKHHFNSVSRIRRF HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQRKDFLEWMDELKNELKTQFLHESHLDPTLKEERIKRASVDFDYFARTYFPHYFTIKGE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCEEEEEECC CGLHLHLNEVFTKIALKKESKGEKHAIAAPRAHGKSTYTSQLFPLWCLVFNYKSFIVEIS CCEEEEHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DAVELMEGMLEAIKAELEDNPHLKLDFPEVVGIGKTWRVGEFVSNNGVKIKAFGSGKRLR HHHHHHHHHHHHHHHHCCCCCCEEEECHHHHCCCCCCCCCHHHCCCCEEEEEECCCCCCC GVRYGVKRPDLVILDDLENDTNVRSKDQRDKLEDWVDEAVLNLGSADGSLDVLYIGTILH HHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECC NDSVLSRKLKLGFWNPKVFRSIEEFPQRLDLWDEYAMLYRNADFNTAHQFYLKNKVLMDK CCHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHCHHHHHC GAKVLWKEAKSLEDLMKLRAENLKAFNKEQLNNPRSENQIFSLDGINFYDDLPAINQYYM CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEECCCCHHCCCCCCCEEEE YIDPAGEKAKSDFTAITIIGKGAKGFYVAESIVKILKAQSIIKTIFNLQKIYKCRLIEIE EECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE TNGGQFFLKKWLQEKSLESGVFLPLRGKNNSVSKFERIESLSLAFENEELFLHKSQTMLI CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHEECCCEEEEECHHHHHH NQLLEFPEGKNDDAPDSLAGAFLLARTKSSIKRRKHHFNSVSRIRRF HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA