| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237250
Identifier: 57237250
GI number: 57237250
Start: 221956
End: 222192
Strand: Reverse
Name: 57237250
Synonym: CJE0239
Alternate gene names: NA
Gene position: 222192-221956 (Counterclockwise)
Preceding gene: 57237251
Following gene: 57237249
Centisome position: 12.5
GC content: 27.43
Gene sequence:
>237_bases ATGAGAATTTTCCTATTAATTATACCTTTTGTTTTTTTAAGCGCTTGTGCTTCTAAAGATATTTTGATTAAAACTGAAAT CAAAGAAGTTAAAGTTCCTATTAAATGCCCTTTAAAACTTCCTTTAAAGCCTTTAGACAAAAAAGACTTAGAAAGTGCTA AAGAAATCTCTAAATATTACTTAGAAGTTGAAAATATAGCCAAGCTTTGCACAGGAGAGAAAGATGAAAGAAAATAA
Upstream 100 bases:
>100_bases AAGTGGATAAGGTTTTTATTAAAGATAAAAGCTGTGAGAGTGAACTTAAAGCTTATAAAGAATTATTTAATATTTTAGGA GCAAAAAAGTGAATGATAAA
Downstream 100 bases:
>100_bases TAAAATGATAAATCAAAAAAGCATTGCAAAAGATCTTCTTATAGCTCTTTTGTTTTCAACTTTTGCATTAGCTTTATTAT ATTTATTTGAAATTTTTACA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MRIFLLIIPFVFLSACASKDILIKTEIKEVKVPIKCPLKLPLKPLDKKDLESAKEISKYYLEVENIAKLCTGEKDERK
Sequences:
>Translated_78_residues MRIFLLIIPFVFLSACASKDILIKTEIKEVKVPIKCPLKLPLKPLDKKDLESAKEISKYYLEVENIAKLCTGEKDERK >Mature_78_residues MRIFLLIIPFVFLSACASKDILIKTEIKEVKVPIKCPLKLPLKPLDKKDLESAKEISKYYLEVENIAKLCTGEKDERK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8978; Mature: 8978
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFLLIIPFVFLSACASKDILIKTEIKEVKVPIKCPLKLPLKPLDKKDLESAKEISKYY CCHHHHHHHHHHHHHHCCCCEEEEECHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH LEVENIAKLCTGEKDERK HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRIFLLIIPFVFLSACASKDILIKTEIKEVKVPIKCPLKLPLKPLDKKDLESAKEISKYY CCHHHHHHHHHHHHHHCCCCEEEEECHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH LEVENIAKLCTGEKDERK HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA