| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237206
Identifier: 57237206
GI number: 57237206
Start: 194603
End: 195208
Strand: Reverse
Name: 57237206
Synonym: CJE0194
Alternate gene names: NA
Gene position: 195208-194603 (Counterclockwise)
Preceding gene: 57237207
Following gene: 57237205
Centisome position: 10.98
GC content: 26.4
Gene sequence:
>606_bases ATGTTTTTCTTGCTAAAAAAGATAGAAAATAGCTTGTTTTACTTAAATAAAATTTTATATTTTTTCTTAATTTTATTTTT ATTGATTGGAATTTTGGGTTTCTTTATAAATTCCAATCCTTCAAATCAAATCATCAAAAAACCCTATCTACCTTTTCTTG AAATAGGTGATCTTGTCTTTCGTGCAGGAATAGGAAGTGAAAGTTTTTTAATAGAAAATTTAAGTCAAAGCCCTTATTCT CATATCGCTATGGTAGTTAAAACTTCTCCAACTATACTCATACATGCTACAACAGATGATGACAAAAATGCTAAAAACCA AGTTATCTTAAGCTCTATGGATGATTTTTTAAAACTGAGTCATAAAATTGCTATTAAAAGATTAAAATTTGATGAAAAAA CCAAACAAAAAATAGTTGCTAAAGCTTTGGAACATTTAGGCAGAAAATTTATCATAAGTACAGATAAAGATGCTTTTTAC TGCACTACTTTTTTAGAACAATCTATTAACTCCATTACCCCATTTCATCTTCAATATACTCTAATCAAAGCTCCTTTTAA TGAAGGTTTATATCTTTTTCCACAAGCTTTTTTTGAAAATAATTAA
Upstream 100 bases:
>100_bases GGTGTTAAAGATATTCAAATTGAAGAAAAAACAATCAATAAAGATTCTGCTAAAATCAGAATTTTAGTGTTATTTAACAA TGATAATAATCAAAGCAGCA
Downstream 100 bases:
>100_bases AGCGTATTAATTTTATGAAAGTCAAAAATTTTTAATTTCACATTCACTTCACTTAAAAATTTTATAATGTCATCACTTTA CATTAAGGAGAAATAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MFFLLKKIENSLFYLNKILYFFLILFLLIGILGFFINSNPSNQIIKKPYLPFLEIGDLVFRAGIGSESFLIENLSQSPYS HIAMVVKTSPTILIHATTDDDKNAKNQVILSSMDDFLKLSHKIAIKRLKFDEKTKQKIVAKALEHLGRKFIISTDKDAFY CTTFLEQSINSITPFHLQYTLIKAPFNEGLYLFPQAFFENN
Sequences:
>Translated_201_residues MFFLLKKIENSLFYLNKILYFFLILFLLIGILGFFINSNPSNQIIKKPYLPFLEIGDLVFRAGIGSESFLIENLSQSPYS HIAMVVKTSPTILIHATTDDDKNAKNQVILSSMDDFLKLSHKIAIKRLKFDEKTKQKIVAKALEHLGRKFIISTDKDAFY CTTFLEQSINSITPFHLQYTLIKAPFNEGLYLFPQAFFENN >Mature_201_residues MFFLLKKIENSLFYLNKILYFFLILFLLIGILGFFINSNPSNQIIKKPYLPFLEIGDLVFRAGIGSESFLIENLSQSPYS HIAMVVKTSPTILIHATTDDDKNAKNQVILSSMDDFLKLSHKIAIKRLKFDEKTKQKIVAKALEHLGRKFIISTDKDAFY CTTFLEQSINSITPFHLQYTLIKAPFNEGLYLFPQAFFENN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23159; Mature: 23159
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFLLKKIENSLFYLNKILYFFLILFLLIGILGFFINSNPSNQIIKKPYLPFLEIGDLVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHH RAGIGSESFLIENLSQSPYSHIAMVVKTSPTILIHATTDDDKNAKNQVILSSMDDFLKLS HCCCCCCHHHHHHHCCCCHHHEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH HKIAIKRLKFDEKTKQKIVAKALEHLGRKFIISTDKDAFYCTTFLEQSINSITPFHLQYT HHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE LIKAPFNEGLYLFPQAFFENN EEECCCCCCEEEEEHHHCCCC >Mature Secondary Structure MFFLLKKIENSLFYLNKILYFFLILFLLIGILGFFINSNPSNQIIKKPYLPFLEIGDLVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHH RAGIGSESFLIENLSQSPYSHIAMVVKTSPTILIHATTDDDKNAKNQVILSSMDDFLKLS HCCCCCCHHHHHHHCCCCHHHEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH HKIAIKRLKFDEKTKQKIVAKALEHLGRKFIISTDKDAFYCTTFLEQSINSITPFHLQYT HHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE LIKAPFNEGLYLFPQAFFENN EEECCCCCCEEEEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA