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The map label for this gene is dapB [H]

Identifier: 57237202

GI number: 57237202

Start: 190924

End: 191652

Strand: Reverse

Name: dapB [H]

Synonym: CJE0190

Alternate gene names: 57237202

Gene position: 191652-190924 (Counterclockwise)

Preceding gene: 57237203

Following gene: 57237201

Centisome position: 10.78

GC content: 35.12

Gene sequence:

>729_bases
ATGATTAAAATAGGAATTTATGGCGCTAAAGGACGAATGGGAAAACAGATTGAAGAATGTTTAAAAAGCGAAACACAAGC
ACAAATTTCGATACTTTATGATAAGGGTGGAAATTTAGGAGAGCTTTTTGAAAAAAGCGATGTGATTATTGATTTTTCTT
CCCCAAGTGGAACTCATGAGCTTTTAAATTATGCAAGAACTATGCCTAAACCTTTGGTAATAGGTACAACAGGGCTTGAT
GAGAAAATTTTACATTTGATGCAAAGTGCTAGTGAAGTGATGCCGATTTTTTATGCGACCAATATGTCTTTAGGTGTTGC
GGTTTTAAACTATCTTGCTAGTAAAGCCAGTCAAATGCTAAGAAATTTTGATATAGAAATTTTAGAAATGCATCATCGCC
ATAAAAAAGATGCCCCAAGTGGTACAGCTATGACTTTAGCTCAAAGTGTAGCAAAAGCTAGAAATTTAGAACTTGAAAAA
GTAAGAGTAAGTGGAAGAGATGGCATTATAGGTGAAAGAAGTAAAGATGAGATTGCCGTGATGAGTTTAAGGGGTGGCGA
TATAGTAGGACGCCATATGGTAGGTTTTTACGAAGATGGTGAGTTTTTAGAACTTAATCATACCGCTACTTCAAGGGCGA
CTTTTGCTAAAGGTGCGATTAAAATCGCTATTTGGCTTAGCAAGCAAGAAGCAAAAATGTATTCAATCAATGATTTTTTA
GGAATTTAA

Upstream 100 bases:

>100_bases
TAGATAATTTATATAAATTAAAAAACCATAAAGCTTAATTTTATTATTTAAAATTTACAAAATAAATGCTAAAATCAATA
TTTTATTTTCAAGGAAAAAG

Downstream 100 bases:

>100_bases
AATGTGTGCAGTTGTAGGAGTTATCAATTCAAAAAATGCTAGCACTTATGCGTATTATGCGCTTTTTGCTATGCAACACC
GTGGGCAAGAAGCAAGTGGC

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MIKIGIYGAKGRMGKQIEECLKSETQAQISILYDKGGNLGELFEKSDVIIDFSSPSGTHELLNYARTMPKPLVIGTTGLD
EKILHLMQSASEVMPIFYATNMSLGVAVLNYLASKASQMLRNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEK
VRVSGRDGIIGERSKDEIAVMSLRGGDIVGRHMVGFYEDGEFLELNHTATSRATFAKGAIKIAIWLSKQEAKMYSINDFL
GI

Sequences:

>Translated_242_residues
MIKIGIYGAKGRMGKQIEECLKSETQAQISILYDKGGNLGELFEKSDVIIDFSSPSGTHELLNYARTMPKPLVIGTTGLD
EKILHLMQSASEVMPIFYATNMSLGVAVLNYLASKASQMLRNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEK
VRVSGRDGIIGERSKDEIAVMSLRGGDIVGRHMVGFYEDGEFLELNHTATSRATFAKGAIKIAIWLSKQEAKMYSINDFL
GI
>Mature_242_residues
MIKIGIYGAKGRMGKQIEECLKSETQAQISILYDKGGNLGELFEKSDVIIDFSSPSGTHELLNYARTMPKPLVIGTTGLD
EKILHLMQSASEVMPIFYATNMSLGVAVLNYLASKASQMLRNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEK
VRVSGRDGIIGERSKDEIAVMSLRGGDIVGRHMVGFYEDGEFLELNHTATSRATFAKGAIKIAIWLSKQEAKMYSINDFL
GI

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=263, Percent_Identity=37.6425855513308, Blast_Score=169, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 26698; Mature: 26698

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIGIYGAKGRMGKQIEECLKSETQAQISILYDKGGNLGELFEKSDVIIDFSSPSGTHE
CEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHCCCCEEEEECCCCCHHH
LLNYARTMPKPLVIGTTGLDEKILHLMQSASEVMPIFYATNMSLGVAVLNYLASKASQML
HHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHH
RNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEKVRVSGRDGIIGERSKDEIAV
HHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEE
MSLRGGDIVGRHMVGFYEDGEFLELNHTATSRATFAKGAIKIAIWLSKQEAKMYSINDFL
EEECCCCEECCCEEEEECCCCEEEECCCCCCHHHHHCCEEEEEEEEECCCCCEEECHHHH
GI
CC
>Mature Secondary Structure
MIKIGIYGAKGRMGKQIEECLKSETQAQISILYDKGGNLGELFEKSDVIIDFSSPSGTHE
CEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHCCCCEEEEECCCCCHHH
LLNYARTMPKPLVIGTTGLDEKILHLMQSASEVMPIFYATNMSLGVAVLNYLASKASQML
HHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHH
RNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEKVRVSGRDGIIGERSKDEIAV
HHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEE
MSLRGGDIVGRHMVGFYEDGEFLELNHTATSRATFAKGAIKIAIWLSKQEAKMYSINDFL
EEECCCCEECCCEEEEECCCCEEEECCCCCCHHHHHCCEEEEEEEEECCCCCEEECHHHH
GI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA