Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

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The map label for this gene is 57237183

Identifier: 57237183

GI number: 57237183

Start: 171793

End: 174060

Strand: Direct

Name: 57237183

Synonym: CJE0171

Alternate gene names: NA

Gene position: 171793-174060 (Clockwise)

Preceding gene: 57237182

Following gene: 57237184

Centisome position: 9.66

GC content: 34.3

Gene sequence:

>2268_bases
ATGAAAAAATTAAGTTTATTTTGTGCTGTAGGTTTATGTTTTGCTAGTTTTGCTTTTTCTGAAGAATTAGAATTTGATAG
TCTTGAAATTTCAGGTTCAAAAATCAAAAACGATGAAAAACCTTTTGTAACTCCTGGAGCAACAAGCACAAGAGAGGATA
TAGGTTCAGATACACAAAGTATAGATTCTATAGTGCGTAGTATACCTGGAACCTACACAAACACAGATCAAGCTCAAGGT
ACAGTTCAAGTAAATATTCGTGGTATGAGTGGTTTTGGGCGTGTTAATACCATGATTGACGGTGTTACTCAAACTTTTTA
TGGTAGTGCATCAGATGATCCAGCTAGATTTCATTCACAAACGGGAACTTCAGCTTTTGGAGCTGTTATTGATACAAATT
TCTTAATCGGAGTTGATGTTACAAGGGGAACTTTTGAAGGAGTAGGTGAAGCAAATGCCTTGATGGGATCAGCAAATTTT
AAGACCATAGGTATAAATGATATTGTACATGATGGCAATATCTTTGGATTTTTAGGACGATTTTCTTATGGAAGCAATGG
AATCGGACCAAGTTATATGAGTGCAGTGGCTGGAAAGACTGAACTTGAAAATAATGGATATGTGGGCGCGCTTTTTGGTT
ATAGCGCAAAGAGAATTACTCAAAATTACACTGTAGGCGGGGGTGGCAAGATAGGTAGTAGTATGGTTGATACTGATGGA
GATGGTATAGCTGATACCAATATCGCTCCTTTTGATCCAGATTTTTTAACCCAAAAACCAAACTCTCAACTTTTTAAACT
CGAATATGTCCCAAATTCTTTTACAAACACTATATTTTCTTATCGTAGATATCAAAACGAACTTGCCGGTAGAAAAATAC
ACAATGACAATTATCAACTTGATTTTTGGCACAACCCTAATGAGTGGCTTAATGTAAATACGCTTATTGCCTACAATCAA
GGCATACAAACCTATGGATCAAAATCTACTTTTGCGGCAAACGATGCCATAGCTAACACAAAGGCAAAAAATACTGCCAC
TACTTTTGATATAAGTGATACTTTAGAGGGTGAATGGCATGGATTTAATCTAAACACACGCTTTGGAGCAAATATTTTGC
TTAATGATTATAAAAATACCTTAAATACATCAATTCAAGGAGTAAATTCTATACCTTTTCAGCCTCGTGGAAAACAAAAT
CTTTTTACTTATTATCTTGATAATAGTCTAAATTATGGTATCTTTACACTTGATACCAATGTGAATCTTTTAGATTGGAA
TATCAAAGGACACAGACCTGCTTGCGATGAAGTAAATTTTATGTGTTTTCCAAAAGCGGCGACAGATATAGATAAAAATG
GACTTCGCCTGAATGCTTCTGTCATGCTTTCAGCTGCCATACACGAGCTTTTTACACCCTTTGTAAGTTTTGCGAGAACA
AATAGAGCCCCTAATGTGCAAGAAATGTTTTTCTCAAATAACGAAGGCAATGGTATCAATCCTTTCTTAAAACCAGAACA
AGCCAATACTTGGCAAATAGGTTTTAATTCTTTTAAACATGGACTTTTAAAAGATGATGATCGCTTTGGTTTTAAAGCCG
TGTATTATCATACAAAAATAAAAGATTATATTTATAATGAACAATTTTATCTTGAAGATCCAAGTAAAGATCCTCCAAGC
TCGCAATTTTATATGCACTTAAATTCAGCTGATGATACCATATTTAAGGGTGTGGAGTTAGAATTAAGCTATGACTTGGG
TTTTGCTTATGCTAAAGCTATGTATTCAAGACAAGATACAAGTTCGACTATTTCTCAAACTTCAGGACCTCTTCTTGGCT
CTTTTTCGGCAAGTAAAATCATGGAGCTTCCAAAAGATTATGCAAATGTAGAGCTTGGCTTTAGGTTAAATGATAAAATA
AGCTTTGGTGGTATAGCAAAATACACAGGCAAAGCAAAAAGGGTAAATCCAAATACAGATGATTGGAATAAGGATCCAAA
CAATCCTTATTATCCTAAACCAACCACACAAGACTTACCAAAAATTCCTATTATAGTAGATTTATATTGGAATATAGAAT
GGTTTAAAAACCTCACAATGAGAGCAGAGGTGCAAAATTTATTTGATAAAAACTACATGGATGCCTTAAATGCTTATAAT
TCCTTAGATAATCAGCTTCAATATAATGGAGCAGGTGATCCTATCTATCTTTTTAGCAATTCTGCTCGTGGTCGCACCTT
TGTAGTAAGTTTTGAATATAAATATTAA

Upstream 100 bases:

>100_bases
AAGATTTTAAAAGCAGTAAAAAAATAGTTGTAGTGAATTTAAGCTATGGAGAAATAGATTTAAAAGACAGTGATTATGTT
TTGATTTATAAGGGGGAGGA

Downstream 100 bases:

>100_bases
GGAATATACAAATGTTAAAAAAAATATTTTTATTTTGTTTTTTATTGTTAAATTTAAATGCTGAAGTAAATGTAACAGAT
ACAAATTTATCTTTTGATTC

Product: TonB-dependent colicin receptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 755; Mature: 755

Protein sequence:

>755_residues
MKKLSLFCAVGLCFASFAFSEELEFDSLEISGSKIKNDEKPFVTPGATSTREDIGSDTQSIDSIVRSIPGTYTNTDQAQG
TVQVNIRGMSGFGRVNTMIDGVTQTFYGSASDDPARFHSQTGTSAFGAVIDTNFLIGVDVTRGTFEGVGEANALMGSANF
KTIGINDIVHDGNIFGFLGRFSYGSNGIGPSYMSAVAGKTELENNGYVGALFGYSAKRITQNYTVGGGGKIGSSMVDTDG
DGIADTNIAPFDPDFLTQKPNSQLFKLEYVPNSFTNTIFSYRRYQNELAGRKIHNDNYQLDFWHNPNEWLNVNTLIAYNQ
GIQTYGSKSTFAANDAIANTKAKNTATTFDISDTLEGEWHGFNLNTRFGANILLNDYKNTLNTSIQGVNSIPFQPRGKQN
LFTYYLDNSLNYGIFTLDTNVNLLDWNIKGHRPACDEVNFMCFPKAATDIDKNGLRLNASVMLSAAIHELFTPFVSFART
NRAPNVQEMFFSNNEGNGINPFLKPEQANTWQIGFNSFKHGLLKDDDRFGFKAVYYHTKIKDYIYNEQFYLEDPSKDPPS
SQFYMHLNSADDTIFKGVELELSYDLGFAYAKAMYSRQDTSSTISQTSGPLLGSFSASKIMELPKDYANVELGFRLNDKI
SFGGIAKYTGKAKRVNPNTDDWNKDPNNPYYPKPTTQDLPKIPIIVDLYWNIEWFKNLTMRAEVQNLFDKNYMDALNAYN
SLDNQLQYNGAGDPIYLFSNSARGRTFVVSFEYKY

Sequences:

>Translated_755_residues
MKKLSLFCAVGLCFASFAFSEELEFDSLEISGSKIKNDEKPFVTPGATSTREDIGSDTQSIDSIVRSIPGTYTNTDQAQG
TVQVNIRGMSGFGRVNTMIDGVTQTFYGSASDDPARFHSQTGTSAFGAVIDTNFLIGVDVTRGTFEGVGEANALMGSANF
KTIGINDIVHDGNIFGFLGRFSYGSNGIGPSYMSAVAGKTELENNGYVGALFGYSAKRITQNYTVGGGGKIGSSMVDTDG
DGIADTNIAPFDPDFLTQKPNSQLFKLEYVPNSFTNTIFSYRRYQNELAGRKIHNDNYQLDFWHNPNEWLNVNTLIAYNQ
GIQTYGSKSTFAANDAIANTKAKNTATTFDISDTLEGEWHGFNLNTRFGANILLNDYKNTLNTSIQGVNSIPFQPRGKQN
LFTYYLDNSLNYGIFTLDTNVNLLDWNIKGHRPACDEVNFMCFPKAATDIDKNGLRLNASVMLSAAIHELFTPFVSFART
NRAPNVQEMFFSNNEGNGINPFLKPEQANTWQIGFNSFKHGLLKDDDRFGFKAVYYHTKIKDYIYNEQFYLEDPSKDPPS
SQFYMHLNSADDTIFKGVELELSYDLGFAYAKAMYSRQDTSSTISQTSGPLLGSFSASKIMELPKDYANVELGFRLNDKI
SFGGIAKYTGKAKRVNPNTDDWNKDPNNPYYPKPTTQDLPKIPIIVDLYWNIEWFKNLTMRAEVQNLFDKNYMDALNAYN
SLDNQLQYNGAGDPIYLFSNSARGRTFVVSFEYKY
>Mature_755_residues
MKKLSLFCAVGLCFASFAFSEELEFDSLEISGSKIKNDEKPFVTPGATSTREDIGSDTQSIDSIVRSIPGTYTNTDQAQG
TVQVNIRGMSGFGRVNTMIDGVTQTFYGSASDDPARFHSQTGTSAFGAVIDTNFLIGVDVTRGTFEGVGEANALMGSANF
KTIGINDIVHDGNIFGFLGRFSYGSNGIGPSYMSAVAGKTELENNGYVGALFGYSAKRITQNYTVGGGGKIGSSMVDTDG
DGIADTNIAPFDPDFLTQKPNSQLFKLEYVPNSFTNTIFSYRRYQNELAGRKIHNDNYQLDFWHNPNEWLNVNTLIAYNQ
GIQTYGSKSTFAANDAIANTKAKNTATTFDISDTLEGEWHGFNLNTRFGANILLNDYKNTLNTSIQGVNSIPFQPRGKQN
LFTYYLDNSLNYGIFTLDTNVNLLDWNIKGHRPACDEVNFMCFPKAATDIDKNGLRLNASVMLSAAIHELFTPFVSFART
NRAPNVQEMFFSNNEGNGINPFLKPEQANTWQIGFNSFKHGLLKDDDRFGFKAVYYHTKIKDYIYNEQFYLEDPSKDPPS
SQFYMHLNSADDTIFKGVELELSYDLGFAYAKAMYSRQDTSSTISQTSGPLLGSFSASKIMELPKDYANVELGFRLNDKI
SFGGIAKYTGKAKRVNPNTDDWNKDPNNPYYPKPTTQDLPKIPIIVDLYWNIEWFKNLTMRAEVQNLFDKNYMDALNAYN
SLDNQLQYNGAGDPIYLFSNSARGRTFVVSFEYKY

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 84163; Mature: 84163

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSLFCAVGLCFASFAFSEELEFDSLEISGSKIKNDEKPFVTPGATSTREDIGSDTQS
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEECCCCCCCHHHHCCCHHH
IDSIVRSIPGTYTNTDQAQGTVQVNIRGMSGFGRVNTMIDGVTQTFYGSASDDPARFHSQ
HHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCC
TGTSAFGAVIDTNFLIGVDVTRGTFEGVGEANALMGSANFKTIGINDIVHDGNIFGFLGR
CCCCHHHHEEECCEEEEEEECCCCCCCCCCCHHEECCCCEEEECCHHEEECCCEEEEEEE
FSYGSNGIGPSYMSAVAGKTELENNGYVGALFGYSAKRITQNYTVGGGGKIGSSMVDTDG
CCCCCCCCCHHHHHHHCCCCEECCCCCEEEEECCCHHHHCCCEEECCCCCCCCCCCCCCC
DGIADTNIAPFDPDFLTQKPNSQLFKLEYVPNSFTNTIFSYRRYQNELAGRKIHNDNYQL
CCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEECCCCEEE
DFWHNPNEWLNVNTLIAYNQGIQTYGSKSTFAANDAIANTKAKNTATTFDISDTLEGEWH
EEEECCCCEEEEEEEEEECCCHHHCCCCCEEECCCHHCCCCCCCCEEEEECCCCCCCCEE
GFNLNTRFGANILLNDYKNTLNTSIQGVNSIPFQPRGKQNLFTYYLDNSLNYGIFTLDTN
EECCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECC
VNLLDWNIKGHRPACDEVNFMCFPKAATDIDKNGLRLNASVMLSAAIHELFTPFVSFART
CEEEEEECCCCCCCCCCCCEEEECCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHC
NRAPNVQEMFFSNNEGNGINPFLKPEQANTWQIGFNSFKHGLLKDDDRFGFKAVYYHTKI
CCCCCHHHHHEECCCCCCCCCCCCCCCCCEEEECHHHHCCCCCCCCCCCCEEEEEEEEEH
KDYIYNEQFYLEDPSKDPPSSQFYMHLNSADDTIFKGVELELSYDLGFAYAKAMYSRQDT
HHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCEECCEEEEEEECCHHHHHHHHHHCCCC
SSTISQTSGPLLGSFSASKIMELPKDYANVELGFRLNDKISFGGIAKYTGKAKRVNPNTD
HHHHHHCCCCEEECCCHHHHHHCCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCC
DWNKDPNNPYYPKPTTQDLPKIPIIVDLYWNIEWFKNLTMRAEVQNLFDKNYMDALNAYN
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SLDNQLQYNGAGDPIYLFSNSARGRTFVVSFEYKY
HHCCCEEECCCCCEEEEEECCCCCEEEEEEEEECC
>Mature Secondary Structure
MKKLSLFCAVGLCFASFAFSEELEFDSLEISGSKIKNDEKPFVTPGATSTREDIGSDTQS
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEECCCCCCCHHHHCCCHHH
IDSIVRSIPGTYTNTDQAQGTVQVNIRGMSGFGRVNTMIDGVTQTFYGSASDDPARFHSQ
HHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCC
TGTSAFGAVIDTNFLIGVDVTRGTFEGVGEANALMGSANFKTIGINDIVHDGNIFGFLGR
CCCCHHHHEEECCEEEEEEECCCCCCCCCCCHHEECCCCEEEECCHHEEECCCEEEEEEE
FSYGSNGIGPSYMSAVAGKTELENNGYVGALFGYSAKRITQNYTVGGGGKIGSSMVDTDG
CCCCCCCCCHHHHHHHCCCCEECCCCCEEEEECCCHHHHCCCEEECCCCCCCCCCCCCCC
DGIADTNIAPFDPDFLTQKPNSQLFKLEYVPNSFTNTIFSYRRYQNELAGRKIHNDNYQL
CCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEECCCCEEE
DFWHNPNEWLNVNTLIAYNQGIQTYGSKSTFAANDAIANTKAKNTATTFDISDTLEGEWH
EEEECCCCEEEEEEEEEECCCHHHCCCCCEEECCCHHCCCCCCCCEEEEECCCCCCCCEE
GFNLNTRFGANILLNDYKNTLNTSIQGVNSIPFQPRGKQNLFTYYLDNSLNYGIFTLDTN
EECCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECC
VNLLDWNIKGHRPACDEVNFMCFPKAATDIDKNGLRLNASVMLSAAIHELFTPFVSFART
CEEEEEECCCCCCCCCCCCEEEECCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHC
NRAPNVQEMFFSNNEGNGINPFLKPEQANTWQIGFNSFKHGLLKDDDRFGFKAVYYHTKI
CCCCCHHHHHEECCCCCCCCCCCCCCCCCEEEECHHHHCCCCCCCCCCCCEEEEEEEEEH
KDYIYNEQFYLEDPSKDPPSSQFYMHLNSADDTIFKGVELELSYDLGFAYAKAMYSRQDT
HHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCEECCEEEEEEECCHHHHHHHHHHCCCC
SSTISQTSGPLLGSFSASKIMELPKDYANVELGFRLNDKISFGGIAKYTGKAKRVNPNTD
HHHHHHCCCCEEECCCHHHHHHCCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCC
DWNKDPNNPYYPKPTTQDLPKIPIIVDLYWNIEWFKNLTMRAEVQNLFDKNYMDALNAYN
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SLDNQLQYNGAGDPIYLFSNSARGRTFVVSFEYKY
HHCCCEEECCCCCEEEEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]