| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is ubiA [H]
Identifier: 57237172
GI number: 57237172
Start: 161969
End: 162853
Strand: Reverse
Name: ubiA [H]
Synonym: CJE0160
Alternate gene names: 57237172
Gene position: 162853-161969 (Counterclockwise)
Preceding gene: 57237174
Following gene: 57237171
Centisome position: 9.16
GC content: 30.73
Gene sequence:
>885_bases ATGAACACATTCTGGATAAAATTTAAAGATATTTTAGAACTTGTAGTATTTAAGCATTCTATTTTTGCTTTGCCTTTTTT ATTTTCCTCTATGATTGTAGCATCAAAACTTGCAAATGACACTGCTTGGTTTGGTTTTAAGGCGTTGATTTTAGGCATTA TTTGTGCGGTAAGTGCAAGAAATTTTGCCATGGCTACAAATCGTTTAATGGATGAAGATATAGATAAGGATAATCCTCGT TGTGCAAATCGCCCTAATGTCAGTGGAAAAATAGGTAGAAAAAGCGTATGGATTTTTATCATTATTAATGCACTTATTTT TATATCATGTTCTTATTTTATTAATACCTTGGCCTTTTATTTGTCTTTTCCTGTGCTTTTGGTATTGGCTATTTATTCAG CTTTTAAGCGCTTTAGTTCTTTAGCACATTTAGTTTTAGGATTTTGTTTAGGACTTGCGCCTATTGCAGGAAGTGTTATA ATTATGGGTGAAATTCACATTTATAGCGTTATTTTATGTTTAGGTGTAACTTTTTGGACAGCTGGGTTTGATCTGCTTTA TTCTTTACAAGATATGGAGTATGATAAAAAAATAGGACTTCACTCTATTCCTGCTAAATTTGGTTCAAAGGCTACTTTAT TTATATCAGCTTTTTGCCATATTTTAGCGGTATTATTTTGGCTTCTTTTTGTGTGGGAAGTTTGGGGTGTAGCACTTGGA AAAATAGCACTTATTGGGGTAATTATAAGCGGTATTATTTTAGCCTTGGAACATAAAATTGTTCACAAGAATTTTGCTCA TATTGATAGAGCATTTTTTACTCTAAATGGTTATTTAAGTATTATCTTTTTTATTTTTATTTGGATTGATTTATTATGGA ATTAG
Upstream 100 bases:
>100_bases TGTTCCTATTAATGCTATTTCAAAAAACATTTTAATATTTATCCTAAAATTTATAAAAATTTTAGTAAAATCATAGCAAA AAATATTTTAAAGTAGAAAA
Downstream 100 bases:
>100_bases CACTTTTTAAAGCAGGATTTGAAGCTCATTTAGAATGTTGTGAAATAGAAAATAACCGTTTTCTTGGAGAATACCTAAAA CTTGGAGCAATTTCTCAAAT
Product: prenyltransferase
Products: @OCTA07.txt*3-Octaprenyl-4-Hydroxybenzoate!. [C]
Alternate protein names: 4-HB polyprenyltransferase [H]
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLANDTAWFGFKALILGIICAVSARNFAMATNRLMDEDIDKDNPR CANRPNVSGKIGRKSVWIFIIINALIFISCSYFINTLAFYLSFPVLLVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVI IMGEIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKIGLHSIPAKFGSKATLFISAFCHILAVLFWLLFVWEVWGVALG KIALIGVIISGIILALEHKIVHKNFAHIDRAFFTLNGYLSIIFFIFIWIDLLWN
Sequences:
>Translated_294_residues MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLANDTAWFGFKALILGIICAVSARNFAMATNRLMDEDIDKDNPR CANRPNVSGKIGRKSVWIFIIINALIFISCSYFINTLAFYLSFPVLLVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVI IMGEIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKIGLHSIPAKFGSKATLFISAFCHILAVLFWLLFVWEVWGVALG KIALIGVIISGIILALEHKIVHKNFAHIDRAFFTLNGYLSIIFFIFIWIDLLWN >Mature_294_residues MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLANDTAWFGFKALILGIICAVSARNFAMATNRLMDEDIDKDNPR CANRPNVSGKIGRKSVWIFIIINALIFISCSYFINTLAFYLSFPVLLVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVI IMGEIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKIGLHSIPAKFGSKATLFISAFCHILAVLFWLLFVWEVWGVALG KIALIGVIISGIILALEHKIVHKNFAHIDRAFFTLNGYLSIIFFIFIWIDLLWN
Specific function: Synthesis of 3-octaprenyl-4-hydroxybenzoate [H]
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ubiA prenyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006370 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: 2.5.1.- [C]
Molecular weight: Translated: 33157; Mature: 33157
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLANDTAWFGFKALILGIICAVSAR CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NFAMATNRLMDEDIDKDNPRCANRPNVSGKIGRKSVWIFIIINALIFISCSYFINTLAFY HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFPVLLVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVIIMGEIHIYSVILCLGVTFWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHH AGFDLLYSLQDMEYDKKIGLHSIPAKFGSKATLFISAFCHILAVLFWLLFVWEVWGVALG HHHHHHHHHHHCCHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIALIGVIISGIILALEHKIVHKNFAHIDRAFFTLNGYLSIIFFIFIWIDLLWN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLANDTAWFGFKALILGIICAVSAR CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NFAMATNRLMDEDIDKDNPRCANRPNVSGKIGRKSVWIFIIINALIFISCSYFINTLAFY HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFPVLLVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVIIMGEIHIYSVILCLGVTFWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHH AGFDLLYSLQDMEYDKKIGLHSIPAKFGSKATLFISAFCHILAVLFWLLFVWEVWGVALG HHHHHHHHHHHCCHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIALIGVIISGIILALEHKIVHKNFAHIDRAFFTLNGYLSIIFFIFIWIDLLWN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-Hydroxybenzoate; Farnesylfarnesylgeraniol [C]
Specific reaction: 4-Hydroxybenzoate + Farnesylfarnesylgeraniol = @OCTA07.txt*3-Octaprenyl-4-Hydroxybenzoate!. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA