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The map label for this gene is rsmE [H]

Identifier: 57237164

GI number: 57237164

Start: 157180

End: 157836

Strand: Reverse

Name: rsmE [H]

Synonym: CJE0152

Alternate gene names: 57237164

Gene position: 157836-157180 (Counterclockwise)

Preceding gene: 57237165

Following gene: 57237163

Centisome position: 8.88

GC content: 25.72

Gene sequence:

>657_bases
ATGCAATTTTTGTATAACAAGCAAGCTGGAGAAGAGTTTATACAACTTCAAGGTGAAAACTTTAACCATTTAAAAGTAAG
AAGAGTAAAGGAAAATTCGGAGCTAAATCTTAGAAATTTACAAGATAATTTTCTTTACAACTATACAATCACAAATTTAA
CAAGAAATTCTTGCACTTTAAAATTTTTAAACAAAAAATCACAAAATATAAAACAAAGTGAATTAAACTTAGCCTTAGCC
ATTATAGATATTAAAATTTTAGAAAAAACTCTACCTTTCTTAAATGAACTTGGAGTAAAAAAGTTACATTTGGTTTTTAC
AAATTTTTCACAAAGAAATTTTAAAATCGATTTAGAAAGATTTGAAAAAATCATTATTTCTTCTTGTGAACAATGCGGTA
GAAATACTAAAATGGATTTAATTATCCACCAAAGCACTCAAGAATTTGTTCAAAAATTTCCAAATGCAATTATGGTTGAT
TTTCAAGGAGAACAACAAAGTCATTTCGATGAAAAAGAATTATATTTTATAGGTCCTGAAGGTGGATTTAACAATGATGA
GAGATTATTGTTTAACCGGAAAATCTCTCTTAAAAGCTCTAATATTCTAAAAAGTCAAACAGCTATTATAGCTATAGCTT
CAAAAATTTTGCTTTAA

Upstream 100 bases:

>100_bases
TTTAGAAAATATGCCACTTTTAGATGGATTAGTTGTTTGATTTTACCTTTTGAAATTTTTTTATTGTTTTTGCCTTTTTT
AATAGAAAGATATCTATAAA

Downstream 100 bases:

>100_bases
CTTTTCTTAAATTAATCTCTTTTTTATGTTAAATAATTTATAATCACGGCTTATTGTTTTAATTTTTAAGGAAAACTAAT
GAAAAAAGAAATTCACCCAG

Product: 16S ribosomal RNA methyltransferase RsmE

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MQFLYNKQAGEEFIQLQGENFNHLKVRRVKENSELNLRNLQDNFLYNYTITNLTRNSCTLKFLNKKSQNIKQSELNLALA
IIDIKILEKTLPFLNELGVKKLHLVFTNFSQRNFKIDLERFEKIIISSCEQCGRNTKMDLIIHQSTQEFVQKFPNAIMVD
FQGEQQSHFDEKELYFIGPEGGFNNDERLLFNRKISLKSSNILKSQTAIIAIASKILL

Sequences:

>Translated_218_residues
MQFLYNKQAGEEFIQLQGENFNHLKVRRVKENSELNLRNLQDNFLYNYTITNLTRNSCTLKFLNKKSQNIKQSELNLALA
IIDIKILEKTLPFLNELGVKKLHLVFTNFSQRNFKIDLERFEKIIISSCEQCGRNTKMDLIIHQSTQEFVQKFPNAIMVD
FQGEQQSHFDEKELYFIGPEGGFNNDERLLFNRKISLKSSNILKSQTAIIAIASKILL
>Mature_218_residues
MQFLYNKQAGEEFIQLQGENFNHLKVRRVKENSELNLRNLQDNFLYNYTITNLTRNSCTLKFLNKKSQNIKQSELNLALA
IIDIKILEKTLPFLNELGVKKLHLVFTNFSQRNFKIDLERFEKIIISSCEQCGRNTKMDLIIHQSTQEFVQKFPNAIMVD
FQGEQQSHFDEKELYFIGPEGGFNNDERLLFNRKISLKSSNILKSQTAIIAIASKILL

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 25469; Mature: 25469

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFLYNKQAGEEFIQLQGENFNHLKVRRVKENSELNLRNLQDNFLYNYTITNLTRNSCTL
CCCCCCCCCCCHHEEECCCCCCCEEEEEECCCCCCCEEECCCCEEEEEEEECEECCCEEE
KFLNKKSQNIKQSELNLALAIIDIKILEKTLPFLNELGVKKLHLVFTNFSQRNFKIDLER
EEECCCCCCCCHHHHEEEEEEEHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEHHH
FEKIIISSCEQCGRNTKMDLIIHQSTQEFVQKFPNAIMVDFQGEQQSHFDEKELYFIGPE
HHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCC
GGFNNDERLLFNRKISLKSSNILKSQTAIIAIASKILL
CCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQFLYNKQAGEEFIQLQGENFNHLKVRRVKENSELNLRNLQDNFLYNYTITNLTRNSCTL
CCCCCCCCCCCHHEEECCCCCCCEEEEEECCCCCCCEEECCCCEEEEEEEECEECCCEEE
KFLNKKSQNIKQSELNLALAIIDIKILEKTLPFLNELGVKKLHLVFTNFSQRNFKIDLER
EEECCCCCCCCHHHHEEEEEEEHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEHHH
FEKIIISSCEQCGRNTKMDLIIHQSTQEFVQKFPNAIMVDFQGEQQSHFDEKELYFIGPE
HHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCC
GGFNNDERLLFNRKISLKSSNILKSQTAIIAIASKILL
CCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]