| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237147
Identifier: 57237147
GI number: 57237147
Start: 141335
End: 142666
Strand: Direct
Name: 57237147
Synonym: CJE0135
Alternate gene names: NA
Gene position: 141335-142666 (Clockwise)
Preceding gene: 57237146
Following gene: 57237151
Centisome position: 7.95
GC content: 25.68
Gene sequence:
>1332_bases ATGAATAGCACTTTTTCCATCATCGAATACCAAGCTTTTTCTAAAGAAGATTTAAAAGAAATTTTCAAAGAAAAGGCCGA AGGGTTTTATAAAGAGCTAGAAGACTTTGCAAAAAATAATGAAAATCTTCTAGGCTTTAAAAACAAAAATTCCTTAAAAG CTAAAAATTATGTCGGCATTATACAGACTAAAAGCGGGGTTTTGGAGATTTTGCCAAAATGCACGAATTTAGATAGTTAT AAAAAAGAAGATAGTTCTTCAAATCATGACAAAGAAAAACTAAGAAGATGTTATGAATTAGACAATATTTCTAAAAATAA TGATTTTTATGAAAAAGATTTTAAATTTAATCCTAAAAATCTTTTGATAAATATGCTAAAAACCTTAAAAAACTCCCCCT TTAAAAAATCGCAAATTTCATCTTTGCAAAGTTCTAAAATTCCTTTATTTGAAGTGTTTATCACTATGTTTTTAGATGAA TTTGATAGCGTATATAAAAAAGGCTTGATGAGATCTTATCTAAGTTGCGAAGAAAATAGGGCTTTTTTAAAGGGAAAATT ACTATTTAACGAGCATATCAAGCAAAATTTTATACACAAAGAAAGATTTTTTACAAGCAACGATGAGTTTGTTTTAGATA TAGCACCCAATCGTTTGATAAAATCAACGCTAAATTTTTTAAAATCAAAAACAAGTTTGAATAAATTTAGACTTATAAAA TCTATGCAAATTCTCGATGAGGTAGAATTTTCTAAAAATTATGAAAAAGATTTTAGTTATAAAATTTCAAGACATTTTGA TTATTATGAAAACTTGCTTTTGTGGTGTAAAATTTTCTTAAAAAATGAAAGTTTTATGCCTTATCATGGTAAAAATGAAG CTTTTGCTTTGCTTTTTCCTATGGAGAAAATTTTTGAAGATTATGTAGCTTATATGCTAAAAAAAGTAAATCCAGCTCAA GATATTAAAGTTCAAAACAATGGAAAGTATTTAATCTCAAAAAATGATGAAAATTGTTTCATGTTAAAGCCTGATTTATA TATAGAAAATAAAATGATCCTAGATACCAAATGGAAAATTCCAAATGATAGTGAAAATGAGAAAAAACAGGGTATAGAAC AAAGCGATTTGTATCAAATGTTTGCTTATGCTTGCAAATTTAAAATTTATGATATTAAACTTGTGTATCCTTTATGTGAA AAAACTCAAGATTTACAAAGAAAAATCGCAGAAAAATTTTTTGTTTTTAAAGCAAGCGAACATTTGTATTTTAAAGAACA AGGGCAAAAAGATATAAAAGTCCAAGTATTTTTTGCACCTTTACCTTTTTAA
Upstream 100 bases:
>100_bases ATTTATAATATTGCTTCATTTGATGATAAAATTTGGGATAAAATAGAAATATATCAAGCAATTTATAATGATGAAATAGC AAATAAATTAAAAAACGAAA
Downstream 100 bases:
>100_bases AAATTTGCCTATCAAATGCACTAAAAAACCAAAGCAAGCTACAGCTATGATGCAAGCACCGCTTGAGAGATTAAGATAAT AACTAAGTATAAGTCCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: 5-Methylcytosine Restriction System Component-Like Protein; 5-Methylcytosine Restriction System Component; McrBC 5-Methylcytosine Restriction System Component-Like; McrBC Catalytic Subunit McrC; McrBC Restriction Endonuclease System Subunit McrC; 5-Methylcytosine-Specific Restriction Protein C; McrBC 5-Methylcytosine Restriction Subunit McrC; 5-Methylcytosine Restriction System Component- Like Protein
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MNSTFSIIEYQAFSKEDLKEIFKEKAEGFYKELEDFAKNNENLLGFKNKNSLKAKNYVGIIQTKSGVLEILPKCTNLDSY KKEDSSSNHDKEKLRRCYELDNISKNNDFYEKDFKFNPKNLLINMLKTLKNSPFKKSQISSLQSSKIPLFEVFITMFLDE FDSVYKKGLMRSYLSCEENRAFLKGKLLFNEHIKQNFIHKERFFTSNDEFVLDIAPNRLIKSTLNFLKSKTSLNKFRLIK SMQILDEVEFSKNYEKDFSYKISRHFDYYENLLLWCKIFLKNESFMPYHGKNEAFALLFPMEKIFEDYVAYMLKKVNPAQ DIKVQNNGKYLISKNDENCFMLKPDLYIENKMILDTKWKIPNDSENEKKQGIEQSDLYQMFAYACKFKIYDIKLVYPLCE KTQDLQRKIAEKFFVFKASEHLYFKEQGQKDIKVQVFFAPLPF
Sequences:
>Translated_443_residues MNSTFSIIEYQAFSKEDLKEIFKEKAEGFYKELEDFAKNNENLLGFKNKNSLKAKNYVGIIQTKSGVLEILPKCTNLDSY KKEDSSSNHDKEKLRRCYELDNISKNNDFYEKDFKFNPKNLLINMLKTLKNSPFKKSQISSLQSSKIPLFEVFITMFLDE FDSVYKKGLMRSYLSCEENRAFLKGKLLFNEHIKQNFIHKERFFTSNDEFVLDIAPNRLIKSTLNFLKSKTSLNKFRLIK SMQILDEVEFSKNYEKDFSYKISRHFDYYENLLLWCKIFLKNESFMPYHGKNEAFALLFPMEKIFEDYVAYMLKKVNPAQ DIKVQNNGKYLISKNDENCFMLKPDLYIENKMILDTKWKIPNDSENEKKQGIEQSDLYQMFAYACKFKIYDIKLVYPLCE KTQDLQRKIAEKFFVFKASEHLYFKEQGQKDIKVQVFFAPLPF >Mature_443_residues MNSTFSIIEYQAFSKEDLKEIFKEKAEGFYKELEDFAKNNENLLGFKNKNSLKAKNYVGIIQTKSGVLEILPKCTNLDSY KKEDSSSNHDKEKLRRCYELDNISKNNDFYEKDFKFNPKNLLINMLKTLKNSPFKKSQISSLQSSKIPLFEVFITMFLDE FDSVYKKGLMRSYLSCEENRAFLKGKLLFNEHIKQNFIHKERFFTSNDEFVLDIAPNRLIKSTLNFLKSKTSLNKFRLIK SMQILDEVEFSKNYEKDFSYKISRHFDYYENLLLWCKIFLKNESFMPYHGKNEAFALLFPMEKIFEDYVAYMLKKVNPAQ DIKVQNNGKYLISKNDENCFMLKPDLYIENKMILDTKWKIPNDSENEKKQGIEQSDLYQMFAYACKFKIYDIKLVYPLCE KTQDLQRKIAEKFFVFKASEHLYFKEQGQKDIKVQVFFAPLPF
Specific function: Unknown
COG id: COG4268
COG function: function code V; McrBC 5-methylcytosine restriction system component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52748; Mature: 52748
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTFSIIEYQAFSKEDLKEIFKEKAEGFYKELEDFAKNNENLLGFKNKNSLKAKNYVGI CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEE IQTKSGVLEILPKCTNLDSYKKEDSSSNHDKEKLRRCYELDNISKNNDFYEKDFKFNPKN EECCCCHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH LLINMLKTLKNSPFKKSQISSLQSSKIPLFEVFITMFLDEFDSVYKKGLMRSYLSCEENR HHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AFLKGKLLFNEHIKQNFIHKERFFTSNDEFVLDIAPNRLIKSTLNFLKSKTSLNKFRLIK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH SMQILDEVEFSKNYEKDFSYKISRHFDYYENLLLWCKIFLKNESFMPYHGKNEAFALLFP HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECC MEKIFEDYVAYMLKKVNPAQDIKVQNNGKYLISKNDENCFMLKPDLYIENKMILDTKWKI HHHHHHHHHHHHHHHCCCHHCEEEECCCEEEEEECCCCEEEECCCEEECCEEEEEEECCC PNDSENEKKQGIEQSDLYQMFAYACKFKIYDIKLVYPLCEKTQDLQRKIAEKFFVFKASE CCCCCCHHHCCCCHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHHHHHHEEECCC HLYFKEQGQKDIKVQVFFAPLPF CEEECCCCCCCEEEEEEEECCCC >Mature Secondary Structure MNSTFSIIEYQAFSKEDLKEIFKEKAEGFYKELEDFAKNNENLLGFKNKNSLKAKNYVGI CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEE IQTKSGVLEILPKCTNLDSYKKEDSSSNHDKEKLRRCYELDNISKNNDFYEKDFKFNPKN EECCCCHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH LLINMLKTLKNSPFKKSQISSLQSSKIPLFEVFITMFLDEFDSVYKKGLMRSYLSCEENR HHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AFLKGKLLFNEHIKQNFIHKERFFTSNDEFVLDIAPNRLIKSTLNFLKSKTSLNKFRLIK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH SMQILDEVEFSKNYEKDFSYKISRHFDYYENLLLWCKIFLKNESFMPYHGKNEAFALLFP HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECC MEKIFEDYVAYMLKKVNPAQDIKVQNNGKYLISKNDENCFMLKPDLYIENKMILDTKWKI HHHHHHHHHHHHHHHCCCHHCEEEECCCEEEEEECCCCEEEECCCEEECCEEEEEEECCC PNDSENEKKQGIEQSDLYQMFAYACKFKIYDIKLVYPLCEKTQDLQRKIAEKFFVFKASE CCCCCCHHHCCCCHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHHHHHHEEECCC HLYFKEQGQKDIKVQVFFAPLPF CEEECCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA