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The map label for this gene is rlmH [H]

Identifier: 57237133

GI number: 57237133

Start: 126783

End: 127244

Strand: Reverse

Name: rlmH [H]

Synonym: CJE0121

Alternate gene names: 57237133

Gene position: 127244-126783 (Counterclockwise)

Preceding gene: 57237134

Following gene: 57237132

Centisome position: 7.16

GC content: 27.71

Gene sequence:

>462_bases
GTGGAAAATAATTTGCAAGTTAATATCTTTTGTATTCAAAAAAGTGATGAATTTAAAACTTGGAGTGAGAAATACTCTAA
ACTCATCTCCAAATACGCCACTTTAAAAGAAATAAATGTTTTTAATAAAAAAATAGCCTTAGCTCAAAATTTAAATGCCA
TAGAAGCAAAAAAAAGCTATGAAGAAGCTTTTATGCCTTATAAAAAAGGCTATTGTATCGCTCTTGATGAAAAAGGGAAA
GATCTTACAAGTATAGAATTTGCAAAACTCATCCAAGATAAAAATGAATTAAGTTTTTTTATAGGAGGTGCTTATGGTTT
AAGAGAAGAATTTAATCAAAGTTTGGATTTTAGACTATCATTAAGCAAACTTACTTTAGCACATCAATTTGTTAAAACCT
TACTTTTAGAACAAATTTATCGTGCATTTTGCATCAACAACAATCACCCTTATCACAAATAG

Upstream 100 bases:

>100_bases
TTTCAAAAAGCAGAGTTCTTGTTAGAACATGGACTTATAGATGCCATAGTTGAAAGAGGAGAACAAAAACAATATCTTAG
CGATGTACTAAAATTTTTTA

Downstream 100 bases:

>100_bases
AAAGTTTTAAAATGAAAAAAAATGAAATACAAAATTTCAAAAATATTTTAGAAGAAAGAAAAAAAGCTATCTTAGAAAAT
TTGCAAAGCAATTCAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: 23S rRNA m3Psi1915 methyltransferase; rRNA (pseudouridine-N3-)-methyltransferase rlmH [H]

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MENNLQVNIFCIQKSDEFKTWSEKYSKLISKYATLKEINVFNKKIALAQNLNAIEAKKSYEEAFMPYKKGYCIALDEKGK
DLTSIEFAKLIQDKNELSFFIGGAYGLREEFNQSLDFRLSLSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK

Sequences:

>Translated_153_residues
MENNLQVNIFCIQKSDEFKTWSEKYSKLISKYATLKEINVFNKKIALAQNLNAIEAKKSYEEAFMPYKKGYCIALDEKGK
DLTSIEFAKLIQDKNELSFFIGGAYGLREEFNQSLDFRLSLSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK
>Mature_153_residues
MENNLQVNIFCIQKSDEFKTWSEKYSKLISKYATLKEINVFNKKIALAQNLNAIEAKKSYEEAFMPYKKGYCIALDEKGK
DLTSIEFAKLIQDKNELSFFIGGAYGLREEFNQSLDFRLSLSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK

Specific function: Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA [H]

COG id: COG1576

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase rlmH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003742 [H]

Pfam domain/function: PF02590 SPOUT_MTase [H]

EC number: NA

Molecular weight: Translated: 17866; Mature: 17866

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNLQVNIFCIQKSDEFKTWSEKYSKLISKYATLKEINVFNKKIALAQNLNAIEAKKSY
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EEAFMPYKKGYCIALDEKGKDLTSIEFAKLIQDKNELSFFIGGAYGLREEFNQSLDFRLS
HHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCEEEH
LSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MENNLQVNIFCIQKSDEFKTWSEKYSKLISKYATLKEINVFNKKIALAQNLNAIEAKKSY
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EEAFMPYKKGYCIALDEKGKDLTSIEFAKLIQDKNELSFFIGGAYGLREEFNQSLDFRLS
HHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCEEEH
LSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]