| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237100
Identifier: 57237100
GI number: 57237100
Start: 101764
End: 102966
Strand: Direct
Name: 57237100
Synonym: CJE0088
Alternate gene names: NA
Gene position: 101764-102966 (Clockwise)
Preceding gene: 57237099
Following gene: 57237101
Centisome position: 5.72
GC content: 32.75
Gene sequence:
>1203_bases ATGAAAATAATTAAAATTCTTTTTTTAGGCTTATTTTTAAGCCTAAGTCTTAATGCTAAAGTTATAACCACAACTTCAAC AAAATCAAGCACAGGTGAAGGCACAGGCTTGACTAGGGAAGATGCGATAAACAATGCCATTATAGAGGCTATAGGAAAAA TGAGCGGAGCAAGCATCAATTCTCTTAAGAAATCTAATACTAGCGTTTCAACTGATAATTCAGGTTCAAATATACAAGAT AATTACAGCGAGCAAATTTCAAAAGCCACCAAAGGTAGAGCTGATACTTATGAAATCAATAGTGTTGAACAAGATGCAAA TGGTAAATATACAGCCAATGTAACGATTTTTAAAACCACAACAACAAAAAAGTATCAAGCTCCAGGTTTAAGTGCAGATA ATAGAAGAAGTATTACTGTTTTTGATTCTACTCCAGATGCTGCAAAAAGAGGTATAGGCTCAGCTTTGCAACAAAAAATC ATTTCTGATTTATTGCAAAGTCGTAAATTTAATGTTTTAGACCGTGATTCTAGTGGCTATTATGAAATGGAAAAAGCTTT AATCAAAAGTGGCGACGCAGCTAGCGATGAAGTTTATAAACTTAAAAATGTGTTAGCAACAGATTATATTTTATTGTTTT CTATTTCAGGACTTGAAGGTAAACAAAAAACAAGCAATTTAACAGGAAAAAGCAAAACTGAAATTGAAGTTATCGTAGAT TATCGTGTGCTTTTATTTGCTACAAGACAAATTAAATTTTCTAATACTTTAAGCATGAAAGTCAATCTTAAAGACAATAG TCTTAGTGCCAATGAAACCGCACTCAAACAAATTGCAAATCGTATAGCAGGAGATATTTTAAACGCAATTTATCCTTTGA AAGTTGCAAGTGTTGAAAACAATGAAGTAATATTTTCTCAAAGCTTAAATCAAGGTGATGTTTATGAATGTTTTGCTCTT GGGAAGGTTATAAAAGATACTTATACAAAAGAAAATACAGGAAGAGTAGAAAGCAAAACAGGAAGTATTGAAATCACTCG CACAAGCCCTAAATTTTCTTATGCAAAAATCACAGAAGGTAGTGTAAAAGTGGGCGATATTTGCAGACCTTTAAGTAATA CTGGTAGTGGAAATGGCTACACTATAGGTCGTGATGCAAATTATCAAACCCAAGAAGGCGGCGGAGTAAATCTAGGCTTT TAA
Upstream 100 bases:
>100_bases TTCAAAGTCAAATGCAACAAAAAATGAAGCTAAAAAATCTTCTAGCATACAAAGAAGCTCTAATGTTGTAAATAGCATGG ATGATTTTTAAAGGTAAAAG
Downstream 100 bases:
>100_bases ATTTTTAGAGTTTGATTTTTCTCAAACTCTAAACTCTTTCTTAAATTCATCAAAAATTAAAGAAAAATTTTGTAAAATCG AAATTTTATTAAACCACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MKIIKILFLGLFLSLSLNAKVITTTSTKSSTGEGTGLTREDAINNAIIEAIGKMSGASINSLKKSNTSVSTDNSGSNIQD NYSEQISKATKGRADTYEINSVEQDANGKYTANVTIFKTTTTKKYQAPGLSADNRRSITVFDSTPDAAKRGIGSALQQKI ISDLLQSRKFNVLDRDSSGYYEMEKALIKSGDAASDEVYKLKNVLATDYILLFSISGLEGKQKTSNLTGKSKTEIEVIVD YRVLLFATRQIKFSNTLSMKVNLKDNSLSANETALKQIANRIAGDILNAIYPLKVASVENNEVIFSQSLNQGDVYECFAL GKVIKDTYTKENTGRVESKTGSIEITRTSPKFSYAKITEGSVKVGDICRPLSNTGSGNGYTIGRDANYQTQEGGGVNLGF
Sequences:
>Translated_400_residues MKIIKILFLGLFLSLSLNAKVITTTSTKSSTGEGTGLTREDAINNAIIEAIGKMSGASINSLKKSNTSVSTDNSGSNIQD NYSEQISKATKGRADTYEINSVEQDANGKYTANVTIFKTTTTKKYQAPGLSADNRRSITVFDSTPDAAKRGIGSALQQKI ISDLLQSRKFNVLDRDSSGYYEMEKALIKSGDAASDEVYKLKNVLATDYILLFSISGLEGKQKTSNLTGKSKTEIEVIVD YRVLLFATRQIKFSNTLSMKVNLKDNSLSANETALKQIANRIAGDILNAIYPLKVASVENNEVIFSQSLNQGDVYECFAL GKVIKDTYTKENTGRVESKTGSIEITRTSPKFSYAKITEGSVKVGDICRPLSNTGSGNGYTIGRDANYQTQEGGGVNLGF >Mature_400_residues MKIIKILFLGLFLSLSLNAKVITTTSTKSSTGEGTGLTREDAINNAIIEAIGKMSGASINSLKKSNTSVSTDNSGSNIQD NYSEQISKATKGRADTYEINSVEQDANGKYTANVTIFKTTTTKKYQAPGLSADNRRSITVFDSTPDAAKRGIGSALQQKI ISDLLQSRKFNVLDRDSSGYYEMEKALIKSGDAASDEVYKLKNVLATDYILLFSISGLEGKQKTSNLTGKSKTEIEVIVD YRVLLFATRQIKFSNTLSMKVNLKDNSLSANETALKQIANRIAGDILNAIYPLKVASVENNEVIFSQSLNQGDVYECFAL GKVIKDTYTKENTGRVESKTGSIEITRTSPKFSYAKITEGSVKVGDICRPLSNTGSGNGYTIGRDANYQTQEGGGVNLGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43318; Mature: 43318
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIKILFLGLFLSLSLNAKVITTTSTKSSTGEGTGLTREDAINNAIIEAIGKMSGASIN CHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH SLKKSNTSVSTDNSGSNIQDNYSEQISKATKGRADTYEINSVEQDANGKYTANVTIFKTT HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEEEEEC TTKKYQAPGLSADNRRSITVFDSTPDAAKRGIGSALQQKIISDLLQSRKFNVLDRDSSGY CCCEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCH YEMEKALIKSGDAASDEVYKLKNVLATDYILLFSISGLEGKQKTSNLTGKSKTEIEVIVD HHHHHHHHHCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCHHCCCCCCCCCEEEEEEE YRVLLFATRQIKFSNTLSMKVNLKDNSLSANETALKQIANRIAGDILNAIYPLKVASVEN EEEEEEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCC NEVIFSQSLNQGDVYECFALGKVIKDTYTKENTGRVESKTGSIEITRTSPKFSYAKITEG CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEECCCCCEEEEECCC SVKVGDICRPLSNTGSGNGYTIGRDANYQTQEGGGVNLGF CEEHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEECCC >Mature Secondary Structure MKIIKILFLGLFLSLSLNAKVITTTSTKSSTGEGTGLTREDAINNAIIEAIGKMSGASIN CHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH SLKKSNTSVSTDNSGSNIQDNYSEQISKATKGRADTYEINSVEQDANGKYTANVTIFKTT HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEEEEEC TTKKYQAPGLSADNRRSITVFDSTPDAAKRGIGSALQQKIISDLLQSRKFNVLDRDSSGY CCCEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCH YEMEKALIKSGDAASDEVYKLKNVLATDYILLFSISGLEGKQKTSNLTGKSKTEIEVIVD HHHHHHHHHCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCHHCCCCCCCCCEEEEEEE YRVLLFATRQIKFSNTLSMKVNLKDNSLSANETALKQIANRIAGDILNAIYPLKVASVEN EEEEEEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCC NEVIFSQSLNQGDVYECFALGKVIKDTYTKENTGRVESKTGSIEITRTSPKFSYAKITEG CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEECCCCCEEEEECCC SVKVGDICRPLSNTGSGNGYTIGRDANYQTQEGGGVNLGF CEEHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA