| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237099
Identifier: 57237099
GI number: 57237099
Start: 100417
End: 101754
Strand: Direct
Name: 57237099
Synonym: CJE0087
Alternate gene names: NA
Gene position: 100417-101754 (Clockwise)
Preceding gene: 57237098
Following gene: 57237100
Centisome position: 5.65
GC content: 31.02
Gene sequence:
>1338_bases ATGAAAAAAATATTATTTATCGGCTCTTTAGTTATGGCAAGTTTACTTTATGCACAAGGTTCCCAGCCTGTAGAAATTAC ACAACAAGATATAAATACTCAAAATGAAATGTCTGACGCAAGTACTAAGGATATTACCCCAAAATCAATTGAAGATTTTT TTGAAGAATTTGCCGATAATTTCGGTATAGAATATGGTATAACCAAAGATGGAAAAACTTTTTATACTGGAAAAAGTACT GTTGCTGTAAATGATACTGATCCACAATTTGCACAAGCTTTACAAAATGCTTACCAAAAAGCAATGTTAAATTTGCAAAG CGAATTTATAAGAGATGCTTTTGGAAGAATTGCTACAAGCAAGATTCAAAATTATGAAGCAGACAATTCTACTAATGCTA AGGAATTTGATGAATTGCCAAAAGGTGATAAGGTTGATCAAATTTTAAATAAACTTACACAATTAGCTGGTGCTCAGCTT GATAAGGCATTAAAAGATTTAGGTATAGATACAAATTCTTTAAGCGAAGACAGAAAAAAGACTTTATTAAAGCAAGAATT TCTTAATAAAACTATGACAAATGCCATAGGTTCTATGAGTGGACTTGTTCCTGTGCAAACTATAGTTACACAAAGAAGAG GTGAGTATGATGTAGGTGTTATTGCTGTTATTTCCAATAAAACTCGCCAATTAGCAAAAGATATGGCACTAGCAAGACAG AGTGCTATTAAGGGTAAAGGCAAGGCAATAAGTGAGTATCTGCCAAAAGATACAAAAGGCTTTTTAAATGAATATGGAAT TCGCTTAGTTTATGATGAAAATGGTGCACCTATTATTTTAAGTTATGGAAACTGGGGTTATGTAGCAGATCCTAGCAATG CTAAAAAAACAAATATTTTAGAAGATAGAGCCAAAGAAACAGCACTTACTATGGCTGATGCTGCTATTATAGAGTTTATT AATACAAATTTAAGTCTTAAAGATGAAAGAACAACTGGTGATACTTACGAGGAAATCATCAAACAAAGTATTAATGTTAA TGATAGTTCCACTCAAGAACAAACTCAAAACATAACAAATATTATTGATAAAGTAAATAGTAAAATAAAAGCAAGCGCAA GCGGTAAAATTCGTGGTATTCGTACTCTTAAAAAATGGAGCTATACAAGTGAAAATGGTATTGAACATGTAGGAACTGTG AGATTTTATTCTTATGAAAATTTAGCTAACACAAATGAGGCTTTAAATTCAAAGTCAAATGCAACAAAAAATGAAGCTAA AAAATCTTCTAGCATACAAAGAAGCTCTAATGTTGTAAATAGCATGGATGATTTTTAA
Upstream 100 bases:
>100_bases AAATCAGTTACTTGGTAAAATAAAAATTAATTTATGAATAAAATTTTTTAGCTCAAGTGTTTAGCTTGGGCTTTTTTTAT GATTTTTAAAAGGATACGAA
Downstream 100 bases:
>100_bases AGGTAAAAGATGAAAATAATTAAAATTCTTTTTTTAGGCTTATTTTTAAGCCTAAGTCTTAATGCTAAAGTTATAACCAC AACTTCAACAAAATCAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MKKILFIGSLVMASLLYAQGSQPVEITQQDINTQNEMSDASTKDITPKSIEDFFEEFADNFGIEYGITKDGKTFYTGKST VAVNDTDPQFAQALQNAYQKAMLNLQSEFIRDAFGRIATSKIQNYEADNSTNAKEFDELPKGDKVDQILNKLTQLAGAQL DKALKDLGIDTNSLSEDRKKTLLKQEFLNKTMTNAIGSMSGLVPVQTIVTQRRGEYDVGVIAVISNKTRQLAKDMALARQ SAIKGKGKAISEYLPKDTKGFLNEYGIRLVYDENGAPIILSYGNWGYVADPSNAKKTNILEDRAKETALTMADAAIIEFI NTNLSLKDERTTGDTYEEIIKQSINVNDSSTQEQTQNITNIIDKVNSKIKASASGKIRGIRTLKKWSYTSENGIEHVGTV RFYSYENLANTNEALNSKSNATKNEAKKSSSIQRSSNVVNSMDDF
Sequences:
>Translated_445_residues MKKILFIGSLVMASLLYAQGSQPVEITQQDINTQNEMSDASTKDITPKSIEDFFEEFADNFGIEYGITKDGKTFYTGKST VAVNDTDPQFAQALQNAYQKAMLNLQSEFIRDAFGRIATSKIQNYEADNSTNAKEFDELPKGDKVDQILNKLTQLAGAQL DKALKDLGIDTNSLSEDRKKTLLKQEFLNKTMTNAIGSMSGLVPVQTIVTQRRGEYDVGVIAVISNKTRQLAKDMALARQ SAIKGKGKAISEYLPKDTKGFLNEYGIRLVYDENGAPIILSYGNWGYVADPSNAKKTNILEDRAKETALTMADAAIIEFI NTNLSLKDERTTGDTYEEIIKQSINVNDSSTQEQTQNITNIIDKVNSKIKASASGKIRGIRTLKKWSYTSENGIEHVGTV RFYSYENLANTNEALNSKSNATKNEAKKSSSIQRSSNVVNSMDDF >Mature_445_residues MKKILFIGSLVMASLLYAQGSQPVEITQQDINTQNEMSDASTKDITPKSIEDFFEEFADNFGIEYGITKDGKTFYTGKST VAVNDTDPQFAQALQNAYQKAMLNLQSEFIRDAFGRIATSKIQNYEADNSTNAKEFDELPKGDKVDQILNKLTQLAGAQL DKALKDLGIDTNSLSEDRKKTLLKQEFLNKTMTNAIGSMSGLVPVQTIVTQRRGEYDVGVIAVISNKTRQLAKDMALARQ SAIKGKGKAISEYLPKDTKGFLNEYGIRLVYDENGAPIILSYGNWGYVADPSNAKKTNILEDRAKETALTMADAAIIEFI NTNLSLKDERTTGDTYEEIIKQSINVNDSSTQEQTQNITNIIDKVNSKIKASASGKIRGIRTLKKWSYTSENGIEHVGTV RFYSYENLANTNEALNSKSNATKNEAKKSSSIQRSSNVVNSMDDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49285; Mature: 49285
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILFIGSLVMASLLYAQGSQPVEITQQDINTQNEMSDASTKDITPKSIEDFFEEFADN CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH FGIEYGITKDGKTFYTGKSTVAVNDTDPQFAQALQNAYQKAMLNLQSEFIRDAFGRIATS CCCEEEECCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIQNYEADNSTNAKEFDELPKGDKVDQILNKLTQLAGAQLDKALKDLGIDTNSLSEDRKK HHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH TLLKQEFLNKTMTNAIGSMSGLVPVQTIVTQRRGEYDVGVIAVISNKTRQLAKDMALARQ HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHH SAIKGKGKAISEYLPKDTKGFLNEYGIRLVYDENGAPIILSYGNWGYVADPSNAKKTNIL HHHCCCCCHHHHHCCCCHHHHHHHCCEEEEECCCCCEEEEEECCCCEEECCCCCCHHHHH EDRAKETALTMADAAIIEFINTNLSLKDERTTGDTYEEIIKQSINVNDSSTQEQTQNITN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH IIDKVNSKIKASASGKIRGIRTLKKWSYTSENGIEHVGTVRFYSYENLANTNEALNSKSN HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHCEEEEEEHHHHCCHHHHHCCCCC ATKNEAKKSSSIQRSSNVVNSMDDF CHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKILFIGSLVMASLLYAQGSQPVEITQQDINTQNEMSDASTKDITPKSIEDFFEEFADN CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH FGIEYGITKDGKTFYTGKSTVAVNDTDPQFAQALQNAYQKAMLNLQSEFIRDAFGRIATS CCCEEEECCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIQNYEADNSTNAKEFDELPKGDKVDQILNKLTQLAGAQLDKALKDLGIDTNSLSEDRKK HHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH TLLKQEFLNKTMTNAIGSMSGLVPVQTIVTQRRGEYDVGVIAVISNKTRQLAKDMALARQ HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHH SAIKGKGKAISEYLPKDTKGFLNEYGIRLVYDENGAPIILSYGNWGYVADPSNAKKTNIL HHHCCCCCHHHHHCCCCHHHHHHHCCEEEEECCCCCEEEEEECCCCEEECCCCCCHHHHH EDRAKETALTMADAAIIEFINTNLSLKDERTTGDTYEEIIKQSINVNDSSTQEQTQNITN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH IIDKVNSKIKASASGKIRGIRTLKKWSYTSENGIEHVGTVRFYSYENLANTNEALNSKSN HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHCEEEEEEHHHHCCHHHHHCCCCC ATKNEAKKSSSIQRSSNVVNSMDDF CHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA