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The map label for this gene is flgD [C]

Identifier: 57237056

GI number: 57237056

Start: 60330

End: 61214

Strand: Direct

Name: flgD [C]

Synonym: CJE0041

Alternate gene names: 57237056

Gene position: 60330-61214 (Clockwise)

Preceding gene: 57237055

Following gene: 57237057

Centisome position: 3.39

GC content: 36.84

Gene sequence:

>885_bases
ATGATATCATCATCGGATTGGAATTTAAATACCACTGCTACAACTTCAGGTACTACTTCTTCAGGAAGTACTAGTGGAAC
AACTAGAACAGATTCAAGCAGTAGCTCAGGAATAGTGAGCAATCCAAACGCTACCTTAGATAAGGATGCGTTTTTAAAAC
TTCTTTTGATAGAGCTTCAACATCAAGATCCAACAGATCCTATGGATAGCGATAAAATGCTTACTCAAACTTCGCAGCTT
AGCGCACTTGAAATGCAGCAAAATACCAATACAACTATGCAAAAAATGGTTGAAACTATGCAAAAGCTTTCTGATTCTTT
TAGTACAAGTATGAGTACTTCAGCTTTAGGGGCTATTGGTAAAATGGCAACTGTTTCAGATAATAAAATCAAACTTACAG
GTGCAGATGAGCTTATCGCTCTTAAAATGTATTTGCCTGAAGATTCTGATGAAAACGGTGTTACGCTAGAAATTTATGAT
AGCAATAATAAACTTGTTTTCAGTGAAAAAAGCGATGCTAAATCTATTTCTCAAGGTTTATTTACTATGGAGTGGCCAGG
AAGAAATAACGATGGGGTTTATGCAGGTGATGGTGAGTACACTGTTAAAATGGTTTATAATAATAAAAATGGTGAAAAAA
TCACTGCAAATTACGGAACTTATCCTATCGAAGGTGTTGTTTTTAAAGATGGTGTTGCCTATGCAAAAATGGCTGGACAA
GAAGTTCCTTTTGATGCAATACAAGAAATAACAGATTATAAGCTTGGTTCATCTTCATCTACTGGAGGAAGCGGTTCAAG
TGGAGACTCAAGTGGTGGTTCAAGCGATGGAGATTCTTCTGGGTCTGGATCTACAGAAGATGGCGACAAAGAGGAAAAGG
CATAA

Upstream 100 bases:

>100_bases
GAAAGTGAAAAAGTCAATCTAGAGCTTGTTTTAGCGAAGTATTTTTAATTGGAACACTTATTGCTTAAATAATAAAAAAC
TAAATAAAAAGGAGTTTATA

Downstream 100 bases:

>100_bases
GCCATGATGAATTCATTTTATAATGGGATTTCTGGAGTAAAAAGCAATAGCTTTGGTATTGATATCACTGCTAATAACAT
AGCAAATGTCAATACCACGG

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: Flagellar Basal Body Rod Protein; Basal-Body Rod Protein FlgD; Flagellar Biosynthesis Protein; Flagellar Hook Assembly Protein FlgD; Flagellar Basal-Body Rod Protein FlgD; Flagellar Basal-Body Rod Protein; Flagellar-Hook Assembly Protein FlgD; Flagellar Hook Assembly Protein

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MISSSDWNLNTTATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNATLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQL
SALEMQQNTNTTMQKMVETMQKLSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYD
SNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTYPIEGVVFKDGVAYAKMAGQ
EVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSDGDSSGSGSTEDGDKEEKA

Sequences:

>Translated_294_residues
MISSSDWNLNTTATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNATLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQL
SALEMQQNTNTTMQKMVETMQKLSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYD
SNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTYPIEGVVFKDGVAYAKMAGQ
EVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSDGDSSGSGSTEDGDKEEKA
>Mature_294_residues
MISSSDWNLNTTATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNATLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQL
SALEMQQNTNTTMQKMVETMQKLSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYD
SNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTYPIEGVVFKDGVAYAKMAGQ
EVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSDGDSSGSGSTEDGDKEEKA

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31073; Mature: 31073

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSSDWNLNTTATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNATLDKDAFLKLLLIELQ
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHC
HQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQKLSDSFSTSMSTSALGAIG
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYDSNNKLVFSEKSDAKSISQGL
CEEEECCCEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHCCC
FTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTYPIEGVVFKDGVAYAKMAGQ
EEEECCCCCCCCEEECCCCEEEEEEEECCCCCEEEECCCCCCCCEEEEECCCHHHHHCCC
EVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSDGDSSGSGSTEDGDKEEKA
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MISSSDWNLNTTATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNATLDKDAFLKLLLIELQ
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHC
HQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQKLSDSFSTSMSTSALGAIG
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYDSNNKLVFSEKSDAKSISQGL
CEEEECCCEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHCCC
FTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTYPIEGVVFKDGVAYAKMAGQ
EEEECCCCCCCCEEECCCCEEEEEEEECCCCCEEEECCCCCCCCEEEEECCCHHHHHCCC
EVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSDGDSSGSGSTEDGDKEEKA
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA