| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is ispG [H]
Identifier: 57236989
GI number: 57236989
Start: 718738
End: 719811
Strand: Direct
Name: ispG [H]
Synonym: CJE0785
Alternate gene names: 57236989
Gene position: 718738-719811 (Clockwise)
Preceding gene: 57236987
Following gene: 57236991
Centisome position: 40.43
GC content: 35.29
Gene sequence:
>1074_bases ATGGAGTATAAAAGATTTAAAACCAGACAAATCAAAGTAGGAAATGTTTTAATAGGCGGTGATGCACCCATTTCAGTTCA ATCTATGCTTTTTACTAAAACAAGAGATATAGAAGGTTCTTTAGAACAAATCAATCGTCTTTATTTTGCAGGAGCAAACA TAGTGCGTTTGGCGTGCTTGGATATGGCTGATGCAAGGGCTTTAAAAGAGATTAAAGCTAAAAGTCCTCTACCTTTAATC GTAGATATTCATTTTAATCATAATTTGGCTGTATATTGTGCTGAATTTATCGATGGCGTGCGTATAAATCCTGGCAATAT AGGCTCTAAAGAAAATATTAAAGAAGTGGTAAAAGCATGTAAAGAACGGGGTATCCCTATACGCATCGGTATAAATCACG GCTCCATAGAAAAACAATTTAGTGATAAATTTGGTTATGGTGTCGATGCCATGCTAGAAAGTGCGATGTATAATATCAAG CTTTTAGAGGATTTAGACTTTTTTGATATTAAAATTTCCATGAAGACTTCAGATGCTCAAAAAACTATAGAAGCTTATGA GAGATTAAGACCGCTTTGTGATTATCCTTTTCACTTAGGGGTAACTGAAGCAGGAACTAAATTTCATAGCACTGTAAAAA GTTCTATAGCTTTAGGAAATTTACTTCTTAAAGGTATAGGCGATACTATGCGTGTTTCTATGACGGGTGAGCTTGAAGAA GAAATTCGTGTAGCAAGAGCAATTTTGCAAGATAGCGGAGTACAAAAAAGCGGAGTAAATATTATTTCATGTCCAACTTG CGGTAGGATTCAAAGTGATTTGTTAAGTGCGATTAAAATCGTAGAGGAAAAAACCAAGCATATAAAAGAACCTTTAAACA TCAGTGTCATGGGTTGTGTGGTAAATGCTTTAGGCGAAGCCAAGGGCGCTGATGTGGCTATAGCCTTTGGGAAAAATCAA GGACTTGTCATAAGACATGGTGAAGTTGTAGCTAAATTAAAAGAAAGTGAACTTGTAGATAGATTTTTAGCTGAAGTTGA AGATGAGGTTAAAAGTAGGGCTGTAAAAGAATAA
Upstream 100 bases:
>100_bases TTTAAATGTCATGAAATTTAAATATATTATCAAAAATAAACTTTAATTAAAGCAATAAAAAGTTAAAATTTGATATTAAA ATTTTTCAAAGAGTGAAGTT
Downstream 100 bases:
>100_bases AAGCCTAAAAGCAAGGTTTAACCTTGCTTTTAGAATGGCCATATCGCTTCTATAACTTTACTACCCCAAGGTTTTCTTGT GCTTCTATCCACTTCTCCTT
Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Products: NA
Alternate protein names: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MEYKRFKTRQIKVGNVLIGGDAPISVQSMLFTKTRDIEGSLEQINRLYFAGANIVRLACLDMADARALKEIKAKSPLPLI VDIHFNHNLAVYCAEFIDGVRINPGNIGSKENIKEVVKACKERGIPIRIGINHGSIEKQFSDKFGYGVDAMLESAMYNIK LLEDLDFFDIKISMKTSDAQKTIEAYERLRPLCDYPFHLGVTEAGTKFHSTVKSSIALGNLLLKGIGDTMRVSMTGELEE EIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLLSAIKIVEEKTKHIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQ GLVIRHGEVVAKLKESELVDRFLAEVEDEVKSRAVKE
Sequences:
>Translated_357_residues MEYKRFKTRQIKVGNVLIGGDAPISVQSMLFTKTRDIEGSLEQINRLYFAGANIVRLACLDMADARALKEIKAKSPLPLI VDIHFNHNLAVYCAEFIDGVRINPGNIGSKENIKEVVKACKERGIPIRIGINHGSIEKQFSDKFGYGVDAMLESAMYNIK LLEDLDFFDIKISMKTSDAQKTIEAYERLRPLCDYPFHLGVTEAGTKFHSTVKSSIALGNLLLKGIGDTMRVSMTGELEE EIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLLSAIKIVEEKTKHIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQ GLVIRHGEVVAKLKESELVDRFLAEVEDEVKSRAVKE >Mature_357_residues MEYKRFKTRQIKVGNVLIGGDAPISVQSMLFTKTRDIEGSLEQINRLYFAGANIVRLACLDMADARALKEIKAKSPLPLI VDIHFNHNLAVYCAEFIDGVRINPGNIGSKENIKEVVKACKERGIPIRIGINHGSIEKQFSDKFGYGVDAMLESAMYNIK LLEDLDFFDIKISMKTSDAQKTIEAYERLRPLCDYPFHLGVTEAGTKFHSTVKSSIALGNLLLKGIGDTMRVSMTGELEE EIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLLSAIKIVEEKTKHIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQ GLVIRHGEVVAKLKESELVDRFLAEVEDEVKSRAVKE
Specific function: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate [H]
COG id: COG0821
COG function: function code I; Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispG family [H]
Homologues:
Organism=Escherichia coli, GI1788863, Length=345, Percent_Identity=41.4492753623188, Blast_Score=272, Evalue=2e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011005 - InterPro: IPR016425 - InterPro: IPR004588 [H]
Pfam domain/function: PF04551 GcpE [H]
EC number: =1.17.7.1 [H]
Molecular weight: Translated: 39352; Mature: 39352
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYKRFKTRQIKVGNVLIGGDAPISVQSMLFTKTRDIEGSLEQINRLYFAGANIVRLACL CCCCCCCCCEEEECEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEHHHH DMADARALKEIKAKSPLPLIVDIHFNHNLAVYCAEFIDGVRINPGNIGSKENIKEVVKAC HHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHH KERGIPIRIGINHGSIEKQFSDKFGYGVDAMLESAMYNIKLLEDLDFFDIKISMKTSDAQ HHCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHCEEEECCCCEEEEEEEEECCHHH KTIEAYERLRPLCDYPFHLGVTEAGTKFHSTVKSSIALGNLLLKGIGDTMRVSMTGELEE HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH EIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLLSAIKIVEEKTKHIKEPLNISVMGCV HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH VNALGEAKGADVAIAFGKNQGLVIRHGEVVAKLKESELVDRFLAEVEDEVKSRAVKE HHHHCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEYKRFKTRQIKVGNVLIGGDAPISVQSMLFTKTRDIEGSLEQINRLYFAGANIVRLACL CCCCCCCCCEEEECEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEHHHH DMADARALKEIKAKSPLPLIVDIHFNHNLAVYCAEFIDGVRINPGNIGSKENIKEVVKAC HHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHH KERGIPIRIGINHGSIEKQFSDKFGYGVDAMLESAMYNIKLLEDLDFFDIKISMKTSDAQ HHCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHCEEEECCCCEEEEEEEEECCHHH KTIEAYERLRPLCDYPFHLGVTEAGTKFHSTVKSSIALGNLLLKGIGDTMRVSMTGELEE HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH EIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLLSAIKIVEEKTKHIKEPLNISVMGCV HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH VNALGEAKGADVAIAFGKNQGLVIRHGEVVAKLKESELVDRFLAEVEDEVKSRAVKE HHHHCCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA