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The map label for this gene is 57236976

Identifier: 57236976

GI number: 57236976

Start: 701600

End: 701845

Strand: Direct

Name: 57236976

Synonym: CJE0768

Alternate gene names: NA

Gene position: 701600-701845 (Clockwise)

Preceding gene: 57236965

Following gene: 57236977

Centisome position: 39.46

GC content: 31.71

Gene sequence:

>246_bases
ATGAGAGTAGATAAATTTTTAAATGTAGTTAATATCACGAAAAGAAGAGCTATTTCTGAAGATATGTGTAAAAGTGGCGT
AGTGGGGATTAATGGCGTTATTGTTAAGGCGAGTAAAGAGGTTAAGGTAGGTGATATTATCACTTTACATTTTACTGAAT
ACACTCAAAAATATAAAGTGCTAGCTCTACCTAGTACGAAAAGCATTCCTAAAAACGCACAAAATGAATATGTGGTAAAA
TTATGA

Upstream 100 bases:

>100_bases
TTAAAGAAAAGTTTTTACTTGCTATTTTCTTAAAAAAATAAAGCAAAGGCGTAAGCAAATTTTGTTCCAAAAATTGATTT
TTTTTGCTAAAATTGCTTTT

Downstream 100 bases:

>100_bases
AAGAATTTATTTTAGCAAAAAATGAGATCAAAACGATGCTTCAAATAATGCCTAAAGAAGGTGTTGTTTTGCTTCAAGGA
GATTTGGCTAGCGGAAAAAC

Product: S4 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVIVKASKEVKVGDIITLHFTEYTQKYKVLALPSTKSIPKNAQNEYVVK
L

Sequences:

>Translated_81_residues
MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVIVKASKEVKVGDIITLHFTEYTQKYKVLALPSTKSIPKNAQNEYVVK
L
>Mature_81_residues
MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVIVKASKEVKVGDIITLHFTEYTQKYKVLALPSTKSIPKNAQNEYVVK
L

Specific function: Unknown

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 9067; Mature: 9067

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVIVKASKEVKVGDIITLHFTEYTQKYKV
CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCEEECCEEEEEEECCCCCEEE
LALPSTKSIPKNAQNEYVVKL
EECCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVIVKASKEVKVGDIITLHFTEYTQKYKV
CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCEEECCEEEEEEECCCCCEEE
LALPSTKSIPKNAQNEYVVKL
EECCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]