| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57236962
Identifier: 57236962
GI number: 57236962
Start: 686760
End: 687221
Strand: Direct
Name: 57236962
Synonym: CJE0752
Alternate gene names: NA
Gene position: 686760-687221 (Clockwise)
Preceding gene: 57236961
Following gene: 57236963
Centisome position: 38.63
GC content: 28.35
Gene sequence:
>462_bases GTGGTTGCAAGACAAATAATTTTATTGTTAGCTTGTGTAAGTGTAACTTGGGCAACTCAAATTGAAGTAAAAGCTTTAAA TTTTTACTCAGATGAAAATAAGGGTGAAAGTATTCTTAGTGGAAATGTAGAAGTAATTAGAGGTGATGATATTTTAAATT CTGAAAAATTGATTATTTATACGGATAAAAATCGCAAACCTATTCGTTATGAAGCAATGCAAAATGCTAGGTTTAAGATT GTTTTAAAAGGTAAAACTTATAAAGGTAGTGGAGATAAATTTATTTATAATGTTATTAAAGATACTTACGAGATTAATGG TCATGCTTATATAAATGAGCTTGGAAGCAATCAAAAACTTTTTGGTGATAAAATAATAGTCGATAGAAAAGCTAATATTT ATCGAGTGGAGAGTAAGGATCAAAAACCTGCTCGTTTTGTATTTGACCTTAAAGACAAATGA
Upstream 100 bases:
>100_bases ATACTGATTTTAAAGCTCTAATTAATGGAAGTATTATTAACGGAAATGCTTTAAACTATGATGTAAAAAACAAAATTTTA AATATCCAAGGAGTAAATGC
Downstream 100 bases:
>100_bases TAATTAGTGCTAAATTTATCACTTCTTTAGTGAAATTTGATGAGAATTTGAGCTCAAATTTTAGTGAAGTAGCATTTTTA GGGCGTTCTAATGTCGGAAA
Product: OstA family protein
Products: NA
Alternate protein names: Cell Envelope Biogenesis Protein YhbN; Lipopolysaccharide Transport Periplasmic Protein LptA; OstA-Like Protein; Lipopolysaccharide Transport Periplasmic Protein Lpta
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MVARQIILLLACVSVTWATQIEVKALNFYSDENKGESILSGNVEVIRGDDILNSEKLIIYTDKNRKPIRYEAMQNARFKI VLKGKTYKGSGDKFIYNVIKDTYEINGHAYINELGSNQKLFGDKIIVDRKANIYRVESKDQKPARFVFDLKDK
Sequences:
>Translated_153_residues MVARQIILLLACVSVTWATQIEVKALNFYSDENKGESILSGNVEVIRGDDILNSEKLIIYTDKNRKPIRYEAMQNARFKI VLKGKTYKGSGDKFIYNVIKDTYEINGHAYINELGSNQKLFGDKIIVDRKANIYRVESKDQKPARFVFDLKDK >Mature_153_residues MVARQIILLLACVSVTWATQIEVKALNFYSDENKGESILSGNVEVIRGDDILNSEKLIIYTDKNRKPIRYEAMQNARFKI VLKGKTYKGSGDKFIYNVIKDTYEINGHAYINELGSNQKLFGDKIIVDRKANIYRVESKDQKPARFVFDLKDK
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17585; Mature: 17585
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVARQIILLLACVSVTWATQIEVKALNFYSDENKGESILSGNVEVIRGDDILNSEKLIIY CHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCEEEECCEEEEECCCCCCCCEEEEE TDKNRKPIRYEAMQNARFKIVLKGKTYKGSGDKFIYNVIKDTYEINGHAYINELGSNQKL ECCCCCCEEEEECCCCEEEEEEECCEECCCCCEEEEEEHHCCEECCCEEEEEECCCCCEE FGDKIIVDRKANIYRVESKDQKPARFVFDLKDK CCCEEEEECCCCEEEECCCCCCCEEEEEEECCC >Mature Secondary Structure MVARQIILLLACVSVTWATQIEVKALNFYSDENKGESILSGNVEVIRGDDILNSEKLIIY CHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCEEEECCEEEEECCCCCCCCEEEEE TDKNRKPIRYEAMQNARFKIVLKGKTYKGSGDKFIYNVIKDTYEINGHAYINELGSNQKL ECCCCCCEEEEECCCCEEEEEEECCEECCCCCEEEEEEHHCCEECCCEEEEEECCCCCEE FGDKIIVDRKANIYRVESKDQKPARFVFDLKDK CCCEEEEECCCCEEEECCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA