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The map label for this gene is rlpA

Identifier: 57236959

GI number: 57236959

Start: 684951

End: 685778

Strand: Direct

Name: rlpA

Synonym: CJE0749

Alternate gene names: 57236959

Gene position: 684951-685778 (Clockwise)

Preceding gene: 57236958

Following gene: 57236960

Centisome position: 38.53

GC content: 36.71

Gene sequence:

>828_bases
ATGCAAATAAAAACAATTACACTAAAGTTGTCAGCCGTTAGTCTAGGGGCTTTATTTTTTAGTGGTTGTTTAGGCACTAG
TTTTTTTTCTAGCTTGGATAATGCTCAAGTGTATTATCCTTCAAATGATTTTAAAAGCAGTCCTAGTTCTTCAGGGACTA
AAGGAACGATGAAGCCTTATACTATCAATGGTAAAACTTATTATCCTACTGTTGTAGCAGTAGGCGAAACTGCTGATGGT
ATTGCGAGTTGGTATGGGCCAGGCTTTCACGGCAAGAAAACCTCTAATGGCGAAACCTATAATCAAAATGCTTTAACCGC
GGCTCATAAAACTTTACCTATGAATACCATCTTAAAAGTAACCAATCTAAATAACAATCGTCAAGTTACCGTTCGTGTGA
ATGATAGAGGTCCTTTTGTAAATAATCGTATTATAGATTTATCAAAAGGAGCTGCTAGTCAAATTGATATGATTGCTTCA
GGAACAGCTCCAGTAAGGCTTGAGGTTATAGGGTTTGGATCAAGTAATTCGGGTAATAATATTGTACATTCTAATGTAAA
CTATGGAAATAGTGGAGAGATTGCAAATAATGGACAAATTTATGAAGGTGGAAATTTCATGGTTCAAATTGGAGCCTTTA
AAAACCCAGCTGGAGCACAAACGATAGCAGCAAGATATAAAACTTATAGAACTTATAGCTCTACTATACGCACAAGTTCA
GTGGATGGGTTAAATCGCGTTTTCTTAACAGGCTTTAGAAGTGAAGATGAAGCAAGGGATTTTGCTGCAAGTGGTGCATT
TGCAGGTGCATTTGTTGTAAGAGAGTAG

Upstream 100 bases:

>100_bases
TATAATATAAGTGTTGATGAAATTCGAGAATTCAATAAAATAGCAAAAAATCATCTTAGTATTAATCAAAAATTAATTAT
ACCAATCAAGGAGAATAAAA

Downstream 100 bases:

>100_bases
AAATTATGACAGAATTGATTTTTTTGGATGTAGATGGCTGTTTAACTGATGGAAAAATTATTTATACTTCTAATGGAGAA
TTTATTAAAGAATTTGATGT

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MQIKTITLKLSAVSLGALFFSGCLGTSFFSSLDNAQVYYPSNDFKSSPSSSGTKGTMKPYTINGKTYYPTVVAVGETADG
IASWYGPGFHGKKTSNGETYNQNALTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMIAS
GTAPVRLEVIGFGSSNSGNNIVHSNVNYGNSGEIANNGQIYEGGNFMVQIGAFKNPAGAQTIAARYKTYRTYSSTIRTSS
VDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE

Sequences:

>Translated_275_residues
MQIKTITLKLSAVSLGALFFSGCLGTSFFSSLDNAQVYYPSNDFKSSPSSSGTKGTMKPYTINGKTYYPTVVAVGETADG
IASWYGPGFHGKKTSNGETYNQNALTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMIAS
GTAPVRLEVIGFGSSNSGNNIVHSNVNYGNSGEIANNGQIYEGGNFMVQIGAFKNPAGAQTIAARYKTYRTYSSTIRTSS
VDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE
>Mature_275_residues
MQIKTITLKLSAVSLGALFFSGCLGTSFFSSLDNAQVYYPSNDFKSSPSSSGTKGTMKPYTINGKTYYPTVVAVGETADG
IASWYGPGFHGKKTSNGETYNQNALTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMIAS
GTAPVRLEVIGFGSSNSGNNIVHSNVNYGNSGEIANNGQIYEGGNFMVQIGAFKNPAGAQTIAARYKTYRTYSSTIRTSS
VDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family

Homologues:

Organism=Escherichia coli, GI1786852, Length=91, Percent_Identity=40.6593406593407, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RLPA_CAMJE (Q9PHM1)

Other databases:

- EMBL:   AL111168
- PIR:   E81413
- RefSeq:   YP_002344075.1
- IntAct:   Q9PHM1
- GeneID:   904973
- GenomeReviews:   AL111168_GR
- KEGG:   cje:Cj0646
- HOGENOM:   HBG701137
- OMA:   QIGAFRN
- ProtClustDB:   CLSK878880
- BioCyc:   CJEJ192222:CJ0646-MONOMER
- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730
- Gene3D:   G3DSA:2.40.40.10
- Gene3D:   G3DSA:3.30.70.1070
- TIGRFAMs:   TIGR00413

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR; SSF50685 Barwin_like; SSF110997 Spore_cell-division_bac

EC number: NA

Molecular weight: Translated: 29375; Mature: 29375

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKTITLKLSAVSLGALFFSGCLGTSFFSSLDNAQVYYPSNDFKSSPSSSGTKGTMKPY
CCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCE
TINGKTYYPTVVAVGETADGIASWYGPGFHGKKTSNGETYNQNALTAAHKTLPMNTILKV
EECCCEEEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCEEEE
TNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMIASGTAPVRLEVIGFGSSNSGNN
EECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCCE
IVHSNVNYGNSGEIANNGQIYEGGNFMVQIGAFKNPAGAQTIAARYKTYRTYSSTIRTSS
EEECCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
VDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE
CCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure
MQIKTITLKLSAVSLGALFFSGCLGTSFFSSLDNAQVYYPSNDFKSSPSSSGTKGTMKPY
CCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCE
TINGKTYYPTVVAVGETADGIASWYGPGFHGKKTSNGETYNQNALTAAHKTLPMNTILKV
EECCCEEEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCEEEE
TNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMIASGTAPVRLEVIGFGSSNSGNN
EECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCCE
IVHSNVNYGNSGEIANNGQIYEGGNFMVQIGAFKNPAGAQTIAARYKTYRTYSSTIRTSS
EEECCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
VDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE
CCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10688204