| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21228836
Identifier: 21228836
GI number: 21228836
Start: 3273727
End: 3274029
Strand: Reverse
Name: 21228836
Synonym: MM_2734
Alternate gene names: NA
Gene position: 3274029-3273727 (Counterclockwise)
Preceding gene: 21228837
Following gene: 21228835
Centisome position: 79.93
GC content: 43.23
Gene sequence:
>303_bases ATGGACCTGGCACTTACCCTTGTAGAAAACGTGATGAAGTATATCCGCAAGTTCTCAGGCATTGACGAAGCGTCTCGCGT TGGTGGATCTGACATGATGGAAAAGTTTTGTGAACTGGGCAGGACTGAAGAAGGCCAAAAATTTTACCCATACTTCAGGG AGAGGCTTCATAAACTATACCGTGATTCGGAAGATAGCCCTTACGGGATTGGAGACAATTTACGATATTATATCTCCAAT CTGGTTGACGATATCTCTAATCCTGATGACAACTTTTTCGAAGAAGACCTGCAGGACAATTGA
Upstream 100 bases:
>100_bases TTTACTATCACCCGCGGGGAGCGGCTAGCATGCCTCGTTATTCAGTAGCAAAAAAACTATCAACGACTATTCTGCGGCTT CCGGAGATATTAAGGGGACA
Downstream 100 bases:
>100_bases TCGTCAGCTCTTACCTTTTTTTGATACTTGTTTAAGCTTCATTCTTCATGTTTCATACTCAGATTTCATATTTTTTCCTT TTTTTCAGATTTGAAGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MDLALTLVENVMKYIRKFSGIDEASRVGGSDMMEKFCELGRTEEGQKFYPYFRERLHKLYRDSEDSPYGIGDNLRYYISN LVDDISNPDDNFFEEDLQDN
Sequences:
>Translated_100_residues MDLALTLVENVMKYIRKFSGIDEASRVGGSDMMEKFCELGRTEEGQKFYPYFRERLHKLYRDSEDSPYGIGDNLRYYISN LVDDISNPDDNFFEEDLQDN >Mature_100_residues MDLALTLVENVMKYIRKFSGIDEASRVGGSDMMEKFCELGRTEEGQKFYPYFRERLHKLYRDSEDSPYGIGDNLRYYISN LVDDISNPDDNFFEEDLQDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11781; Mature: 11781
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLALTLVENVMKYIRKFSGIDEASRVGGSDMMEKFCELGRTEEGQKFYPYFRERLHKLY CCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RDSEDSPYGIGDNLRYYISNLVDDISNPDDNFFEEDLQDN CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure MDLALTLVENVMKYIRKFSGIDEASRVGGSDMMEKFCELGRTEEGQKFYPYFRERLHKLY CCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RDSEDSPYGIGDNLRYYISNLVDDISNPDDNFFEEDLQDN CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA