| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is marC [H]
Identifier: 21228833
GI number: 21228833
Start: 3268601
End: 3269239
Strand: Reverse
Name: marC [H]
Synonym: MM_2731
Alternate gene names: 21228833
Gene position: 3269239-3268601 (Counterclockwise)
Preceding gene: 21228834
Following gene: 21228823
Centisome position: 79.81
GC content: 41.63
Gene sequence:
>639_bases ATGGTAACCGAAAATCTCGGATTTTTTATTTATGTATTCTCATCCATCTTTGTGGTTGTAAGCCCTATCAGTGGAGTTGT AACTTTTATCTCCATGACAAGCAAGATGACCCGCAAAGAAAAAAACGATATCGCAAAAAAAGCAGTCATACTAGCATGTG TAATTGCCCTGTTTTTTGCGATTACTGGAAGTATGATACTTAAATTATTCAGCATCAGTGTGGACTCCCTCAGGGTTGCC GGAGGTCTTTTGCTTTTCAGCATAGCGTTTGACATGATGCACGCAAAGGTCTCACGTGAGAGCATTACAGAAGAAGAAAT TACTCAGTCCCAGGAAAGGGAAGATATCTGGGTCTTCCCTATAGGCCTTCCACTTCTGACAGGACCCGGTACGATCAGCA CAGTAATTGTCATTATGGGCATGGCAGAAGGTGTTCAACAAAAAGCAATAGTAGTTGCCTCAATAATACTGACATTCATT ATTTGCCTGTTTATCTTCCTTTTCTCAAGGAGGCTGCACAAATTCATAGGATACAATGGAATGCTGGTCTTCACAAGGCT TATGGGGCTTTTGCTTGCGGCTCTTGCAGTTGACCTGACCGCTGCGGGAATAATAAATATATTTGGGCTCACAATTTAA
Upstream 100 bases:
>100_bases AAGACAAGCAATAAAACTCCGGTAACATTCAAAAGCTAAACACAGAATTATATAAAATAAAGAATAAAATCTCGAGTCCG TAAAAGGACAGGAGAAAAAA
Downstream 100 bases:
>100_bases ATTGAGGAGTTTGATTTGAAAATGTGTCTTATAAACAGCAACATGTACTGCACCCAGTAATCCAGGTTTGAGAACCAGGA CTCTCGAACTTTATAAACTC
Product: multiple antibiotic resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MVTENLGFFIYVFSSIFVVVSPISGVVTFISMTSKMTRKEKNDIAKKAVILACVIALFFAITGSMILKLFSISVDSLRVA GGLLLFSIAFDMMHAKVSRESITEEEITQSQEREDIWVFPIGLPLLTGPGTISTVIVIMGMAEGVQQKAIVVASIILTFI ICLFIFLFSRRLHKFIGYNGMLVFTRLMGLLLAALAVDLTAAGIINIFGLTI
Sequences:
>Translated_212_residues MVTENLGFFIYVFSSIFVVVSPISGVVTFISMTSKMTRKEKNDIAKKAVILACVIALFFAITGSMILKLFSISVDSLRVA GGLLLFSIAFDMMHAKVSRESITEEEITQSQEREDIWVFPIGLPLLTGPGTISTVIVIMGMAEGVQQKAIVVASIILTFI ICLFIFLFSRRLHKFIGYNGMLVFTRLMGLLLAALAVDLTAAGIINIFGLTI >Mature_212_residues MVTENLGFFIYVFSSIFVVVSPISGVVTFISMTSKMTRKEKNDIAKKAVILACVIALFFAITGSMILKLFSISVDSLRVA GGLLLFSIAFDMMHAKVSRESITEEEITQSQEREDIWVFPIGLPLLTGPGTISTVIVIMGMAEGVQQKAIVVASIILTFI ICLFIFLFSRRLHKFIGYNGMLVFTRLMGLLLAALAVDLTAAGIINIFGLTI
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1787494, Length=199, Percent_Identity=36.1809045226131, Blast_Score=111, Evalue=3e-26, Organism=Escherichia coli, GI1787809, Length=200, Percent_Identity=26, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1789842, Length=192, Percent_Identity=26.0416666666667, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 23183; Mature: 23183
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTENLGFFIYVFSSIFVVVSPISGVVTFISMTSKMTRKEKNDIAKKAVILACVIALFFA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITGSMILKLFSISVDSLRVAGGLLLFSIAFDMMHAKVSRESITEEEITQSQEREDIWVFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEE IGLPLLTGPGTISTVIVIMGMAEGVQQKAIVVASIILTFIICLFIFLFSRRLHKFIGYNG ECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH MLVFTRLMGLLLAALAVDLTAAGIINIFGLTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVTENLGFFIYVFSSIFVVVSPISGVVTFISMTSKMTRKEKNDIAKKAVILACVIALFFA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITGSMILKLFSISVDSLRVAGGLLLFSIAFDMMHAKVSRESITEEEITQSQEREDIWVFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEE IGLPLLTGPGTISTVIVIMGMAEGVQQKAIVVASIILTFIICLFIFLFSRRLHKFIGYNG ECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH MLVFTRLMGLLLAALAVDLTAAGIINIFGLTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]