Click here to switch to the map view.

The map label for this gene is 21228794

Identifier: 21228794

GI number: 21228794

Start: 3216274

End: 3217665

Strand: Reverse

Name: 21228794

Synonym: MM_2692

Alternate gene names: NA

Gene position: 3217665-3216274 (Counterclockwise)

Preceding gene: 21228798

Following gene: 21228790

Centisome position: 78.55

GC content: 33.48

Gene sequence:

>1392_bases
ATGAAGAATTATGACTCGATCATAGTAGGCGGAGGTATCAGCGGATTGTTATCTGCGCTAGTGCTGTCCAAATCCGGGAA
GAATGTTCTTCTTTTAGAAAAAAATAGAAATCTTGGAAATAACTGTAATAGTTACCTTGTTAATGGTTATCAAGTTGATA
CTGGACCACATGCTATTACTCAACTTCATGATGGTGGACCCCTAAGATATTTAATGGAAAATTATTTTGATTATGTGCCT
GCTTTTGTTGATTACGGTGATTATTTTATACGCGATGAAGATGGTTTAAAGGAAGTACCTACCACTCTTAAGGGTTATCT
CACGATGGATATGTTGCCGAGAAAAGATCGTTTAATAATTGCTCAATCATTAACTAAACTGCTACTTTCATGGCAATTTG
GGAATGATCTCTCCAATATCTCAGTTTATCAATGCCTGCCATGGAACGCGCTTTCGTCTGATACACAAGAATTTATGGAT
ACATTTAGTTATTTTTTATCTGGAAAACAGGCAAAAGAGACATCGGTTCAGAGAATGTTTGTTGGAAGTGGGTTTATAGG
AGAGGATATAGAGAAGGATATTACTAGTGAAAATAGTGAACATAAATATAATGATAGATTTAAGAGATTATCTTATGTCA
GCAGATTGTTAAATAATAATAAAGTAGATTATAATCAGTATTATCCAAGAAATGGTTTGAAAGCTATATTAAATGCTATT
CTTTACTCTTTACCAGAAACGGTTGAGATTAAAACTGGCACCGCCGTAGAACAGATAATCACAGAAAATAACATTGCAAA
AGGGGTCTTAACGAAAGAAGAGTCATATTTTGCAGATACAATTATTTACTCAGCTTTTGCAAAAGATCTCCCTAAATACA
TTACTGATTTGCCAGAATCTTATATTTCGGATTTAAGTAGAATCAAACAATCGAAAGCTTTAACAATATGGCTTGGTCTG
GATGAAACATTTGAAGAGTTTAATTACACAGGAGGAGAAGTGTGGTTTAAGGATAAACCATTCTGGGCAATGCCAATAAG
CAATTACAATAAGAACTTTGCTCCAAAAGGTAAAAAGCTTGTGGGCTTTATGTTTTCCATAAATGAAGGAAATTCTTTAG
AATCTGAAAAATTAGAGGCATATAATACTATTTTGCGAGTTTATCCGGGGATAAATAACTATATTGAGATGATTCATTAT
CAAATAACTATTCCAGAAAAAGCTTCGGTGTCAATAAATGGCTTCATTGCAGATACAGTTACTCCAGTAAGAAATCTATA
TCTAGTTGGTACAGATGTAGATGACCGTAGTATGGGGATAACAAGAGCTGCTTATTCTATAATCAAGTTAATAAAATCTT
TGAGAATAGACGGCTTTATCATTGAACTTTAA

Upstream 100 bases:

>100_bases
TTGTATAAATATTACATATATTTTCTATATTTTTACGGAGTTTAGATGAATAATCACAAAACCCAAAAATATATAAAGTC
AAACCAAATTAATTAAATTC

Downstream 100 bases:

>100_bases
AAAATCATACATAATTGTTCTGAGGCTTTATTTATTAGGGAATAAAATCGGTTTTTGAATGACTCATTGTTTTTATAAGG
CTCATTCTTTAAAAACAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MKNYDSIIVGGGISGLLSALVLSKSGKNVLLLEKNRNLGNNCNSYLVNGYQVDTGPHAITQLHDGGPLRYLMENYFDYVP
AFVDYGDYFIRDEDGLKEVPTTLKGYLTMDMLPRKDRLIIAQSLTKLLLSWQFGNDLSNISVYQCLPWNALSSDTQEFMD
TFSYFLSGKQAKETSVQRMFVGSGFIGEDIEKDITSENSEHKYNDRFKRLSYVSRLLNNNKVDYNQYYPRNGLKAILNAI
LYSLPETVEIKTGTAVEQIITENNIAKGVLTKEESYFADTIIYSAFAKDLPKYITDLPESYISDLSRIKQSKALTIWLGL
DETFEEFNYTGGEVWFKDKPFWAMPISNYNKNFAPKGKKLVGFMFSINEGNSLESEKLEAYNTILRVYPGINNYIEMIHY
QITIPEKASVSINGFIADTVTPVRNLYLVGTDVDDRSMGITRAAYSIIKLIKSLRIDGFIIEL

Sequences:

>Translated_463_residues
MKNYDSIIVGGGISGLLSALVLSKSGKNVLLLEKNRNLGNNCNSYLVNGYQVDTGPHAITQLHDGGPLRYLMENYFDYVP
AFVDYGDYFIRDEDGLKEVPTTLKGYLTMDMLPRKDRLIIAQSLTKLLLSWQFGNDLSNISVYQCLPWNALSSDTQEFMD
TFSYFLSGKQAKETSVQRMFVGSGFIGEDIEKDITSENSEHKYNDRFKRLSYVSRLLNNNKVDYNQYYPRNGLKAILNAI
LYSLPETVEIKTGTAVEQIITENNIAKGVLTKEESYFADTIIYSAFAKDLPKYITDLPESYISDLSRIKQSKALTIWLGL
DETFEEFNYTGGEVWFKDKPFWAMPISNYNKNFAPKGKKLVGFMFSINEGNSLESEKLEAYNTILRVYPGINNYIEMIHY
QITIPEKASVSINGFIADTVTPVRNLYLVGTDVDDRSMGITRAAYSIIKLIKSLRIDGFIIEL
>Mature_463_residues
MKNYDSIIVGGGISGLLSALVLSKSGKNVLLLEKNRNLGNNCNSYLVNGYQVDTGPHAITQLHDGGPLRYLMENYFDYVP
AFVDYGDYFIRDEDGLKEVPTTLKGYLTMDMLPRKDRLIIAQSLTKLLLSWQFGNDLSNISVYQCLPWNALSSDTQEFMD
TFSYFLSGKQAKETSVQRMFVGSGFIGEDIEKDITSENSEHKYNDRFKRLSYVSRLLNNNKVDYNQYYPRNGLKAILNAI
LYSLPETVEIKTGTAVEQIITENNIAKGVLTKEESYFADTIIYSAFAKDLPKYITDLPESYISDLSRIKQSKALTIWLGL
DETFEEFNYTGGEVWFKDKPFWAMPISNYNKNFAPKGKKLVGFMFSINEGNSLESEKLEAYNTILRVYPGINNYIEMIHY
QITIPEKASVSINGFIADTVTPVRNLYLVGTDVDDRSMGITRAAYSIIKLIKSLRIDGFIIEL

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 52553; Mature: 52553

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNYDSIIVGGGISGLLSALVLSKSGKNVLLLEKNRNLGNNCNSYLVNGYQVDTGPHAIT
CCCCCCEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHEECCEEECCCCHHHH
QLHDGGPLRYLMENYFDYVPAFVDYGDYFIRDEDGLKEVPTTLKGYLTMDMLPRKDRLII
EECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHEEECCCCCCCHHHH
AQSLTKLLLSWQFGNDLSNISVYQCLPWNALSSDTQEFMDTFSYFLSGKQAKETSVQRMF
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHE
VGSGFIGEDIEKDITSENSEHKYNDRFKRLSYVSRLLNNNKVDYNQYYPRNGLKAILNAI
ECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
LYSLPETVEIKTGTAVEQIITENNIAKGVLTKEESYFADTIIYSAFAKDLPKYITDLPES
HHHCCCCEEEECCHHHHHHHHCCCHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHH
YISDLSRIKQSKALTIWLGLDETFEEFNYTGGEVWFKDKPFWAMPISNYNKNFAPKGKKL
HHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCEE
VGFMFSINEGNSLESEKLEAYNTILRVYPGINNYIEMIHYQITIPEKASVSINGFIADTV
EEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHEEEEEEEEECCCCCCEEEEEEEHHHH
TPVRNLYLVGTDVDDRSMGITRAAYSIIKLIKSLRIDGFIIEL
HCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MKNYDSIIVGGGISGLLSALVLSKSGKNVLLLEKNRNLGNNCNSYLVNGYQVDTGPHAIT
CCCCCCEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHEECCEEECCCCHHHH
QLHDGGPLRYLMENYFDYVPAFVDYGDYFIRDEDGLKEVPTTLKGYLTMDMLPRKDRLII
EECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHEEECCCCCCCHHHH
AQSLTKLLLSWQFGNDLSNISVYQCLPWNALSSDTQEFMDTFSYFLSGKQAKETSVQRMF
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHE
VGSGFIGEDIEKDITSENSEHKYNDRFKRLSYVSRLLNNNKVDYNQYYPRNGLKAILNAI
ECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
LYSLPETVEIKTGTAVEQIITENNIAKGVLTKEESYFADTIIYSAFAKDLPKYITDLPES
HHHCCCCEEEECCHHHHHHHHCCCHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHH
YISDLSRIKQSKALTIWLGLDETFEEFNYTGGEVWFKDKPFWAMPISNYNKNFAPKGKKL
HHHHHHHHHCCCEEEEEECCHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCEE
VGFMFSINEGNSLESEKLEAYNTILRVYPGINNYIEMIHYQITIPEKASVSINGFIADTV
EEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHEEEEEEEEECCCCCCEEEEEEEHHHH
TPVRNLYLVGTDVDDRSMGITRAAYSIIKLIKSLRIDGFIIEL
HCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2838639 [H]