Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228763

Identifier: 21228763

GI number: 21228763

Start: 3179273

End: 3179701

Strand: Reverse

Name: 21228763

Synonym: MM_2661

Alternate gene names: NA

Gene position: 3179701-3179273 (Counterclockwise)

Preceding gene: 21228773

Following gene: 21228758

Centisome position: 77.62

GC content: 43.12

Gene sequence:

>429_bases
ATGTCAGTAAAAAAGGAACCCCTTATGGAAGAAAAAAAGCCTACATTAAGTGTTCTTAAAGGCAGGTTTAACATTTTAAG
GCTGGAAAAAGACTCTAAAGTGCCTTCCGAAGTATTTGAGAGCGATTTCGTTTCAATTACGCAAACACCCGACGAACTCT
CAGTCGTCTTCCGGGAAAGCAATGTTCAGTCAAGCATTCCTTCCGGCATCCGGGCTGAAAGAGGCTGGAGCTGCCTGAAA
GTTGAGGGTCCTCTTGACTTCTCGCTTACAGGAATTCTTGCAGGAATCAGCAGTGCACTGGCTGAAAAAAGAATCAGCAT
ATTTACTATTTCAACTTACGATACCGATTATATCCTGGTAAAGGAAACAGACCTGGAGCGTACATCAGAAGCCCTTGCAA
ATGAGGGGTATAAAATAAGAAGTCCCTGA

Upstream 100 bases:

>100_bases
ATTTTAACTGAGTATTTATTAAAGCCTGGTCTAAAAGTTGATGCTAAAGATGGTTCTGATGCTCCCGAAACCATAAGTAC
TGAGAGAAATATGAAATAGA

Downstream 100 bases:

>100_bases
GGGGAACAGGACAAAAATATTTTCAAAAATATTTTCTGTCTTTCAATCATCCGGTTCACTGCAGGGCACCAGGATTCAGG
GCAGCCTCTTATCCAAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSVKKEPLMEEKKPTLSVLKGRFNILRLEKDSKVPSEVFESDFVSITQTPDELSVVFRESNVQSSIPSGIRAERGWSCLK
VEGPLDFSLTGILAGISSALAEKRISIFTISTYDTDYILVKETDLERTSEALANEGYKIRSP

Sequences:

>Translated_142_residues
MSVKKEPLMEEKKPTLSVLKGRFNILRLEKDSKVPSEVFESDFVSITQTPDELSVVFRESNVQSSIPSGIRAERGWSCLK
VEGPLDFSLTGILAGISSALAEKRISIFTISTYDTDYILVKETDLERTSEALANEGYKIRSP
>Mature_141_residues
SVKKEPLMEEKKPTLSVLKGRFNILRLEKDSKVPSEVFESDFVSITQTPDELSVVFRESNVQSSIPSGIRAERGWSCLKV
EGPLDFSLTGILAGISSALAEKRISIFTISTYDTDYILVKETDLERTSEALANEGYKIRSP

Specific function: Unknown

COG id: COG3603

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15833; Mature: 15702

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKKEPLMEEKKPTLSVLKGRFNILRLEKDSKVPSEVFESDFVSITQTPDELSVVFRES
CCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCHHHHHCCCEEEECCCHHHEEEEECC
NVQSSIPSGIRAERGWSCLKVEGPLDFSLTGILAGISSALAEKRISIFTISTYDTDYILV
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEE
KETDLERTSEALANEGYKIRSP
ECCCHHHHHHHHHCCCEEECCC
>Mature Secondary Structure 
SVKKEPLMEEKKPTLSVLKGRFNILRLEKDSKVPSEVFESDFVSITQTPDELSVVFRES
CCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCHHHHHCCCEEEECCCHHHEEEEECC
NVQSSIPSGIRAERGWSCLKVEGPLDFSLTGILAGISSALAEKRISIFTISTYDTDYILV
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEE
KETDLERTSEALANEGYKIRSP
ECCCHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA