| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228705
Identifier: 21228705
GI number: 21228705
Start: 3100278
End: 3100703
Strand: Reverse
Name: 21228705
Synonym: MM_2603
Alternate gene names: NA
Gene position: 3100703-3100278 (Counterclockwise)
Preceding gene: 21228709
Following gene: 21228704
Centisome position: 75.69
GC content: 36.85
Gene sequence:
>426_bases ATGTTTTTTGTTCTTGCCTCATATCTTTCTGAAATAGAGAACTATTGCAATATATTCAGATGTAAAAATTGCGGTCGGGA CTTTGCTTACGAAGAAATTAAAAGACCCTTTGTCAAAATAGTAAGCACTTACAACAAATATGAAAAAACAATAACAAGCT ACCTGAAGTGCAGGTACTGCAATGATGAATACATCAGGACTGAAATAGCCCGCCAAAATTCGAAATCCAGGTCAAAGAAG ACAGATAAGAATAGAAAAACCTGCAAAGGTTGCGGGAAGGATTATAGCCTTGTAGAATACAGATATCCGGATGCCCATCT GGAATACCATAATATTTTCAGGACAATCCGGCACTATAAATGTGTACACTGCGGATACGTGGAAGTCCGCATAAAAGATG ACCATATTGCCATAAATAGAGTATAA
Upstream 100 bases:
>100_bases GCTTTTTTTATCCGTTGTACTCTTCGTCACGTTAATTTTAAAAATAGTTTCAGGAGATCCCGCCTCGCTTTTACCACTTG TATCGATCTCCGGGAGCCTG
Downstream 100 bases:
>100_bases AAAAGCAAAACCCATCTGAAAGCTATGAAAAGGATTTTATTTAGCAGGAGAAACTGCCTGAAAGCAAAAAATTAAAAAGA AAATATAAAAAATTTTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MFFVLASYLSEIENYCNIFRCKNCGRDFAYEEIKRPFVKIVSTYNKYEKTITSYLKCRYCNDEYIRTEIARQNSKSRSKK TDKNRKTCKGCGKDYSLVEYRYPDAHLEYHNIFRTIRHYKCVHCGYVEVRIKDDHIAINRV
Sequences:
>Translated_141_residues MFFVLASYLSEIENYCNIFRCKNCGRDFAYEEIKRPFVKIVSTYNKYEKTITSYLKCRYCNDEYIRTEIARQNSKSRSKK TDKNRKTCKGCGKDYSLVEYRYPDAHLEYHNIFRTIRHYKCVHCGYVEVRIKDDHIAINRV >Mature_141_residues MFFVLASYLSEIENYCNIFRCKNCGRDFAYEEIKRPFVKIVSTYNKYEKTITSYLKCRYCNDEYIRTEIARQNSKSRSKK TDKNRKTCKGCGKDYSLVEYRYPDAHLEYHNIFRTIRHYKCVHCGYVEVRIKDDHIAINRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17035; Mature: 17035
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 6.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFVLASYLSEIENYCNIFRCKNCGRDFAYEEIKRPFVKIVSTYNKYEKTITSYLKCRYC CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NDEYIRTEIARQNSKSRSKKTDKNRKTCKGCGKDYSLVEYRYPDAHLEYHNIFRTIRHYK CHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHH CVHCGYVEVRIKDDHIAINRV HEECCEEEEEEECCEEEEECC >Mature Secondary Structure MFFVLASYLSEIENYCNIFRCKNCGRDFAYEEIKRPFVKIVSTYNKYEKTITSYLKCRYC CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NDEYIRTEIARQNSKSRSKKTDKNRKTCKGCGKDYSLVEYRYPDAHLEYHNIFRTIRHYK CHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHH CVHCGYVEVRIKDDHIAINRV HEECCEEEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA