| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is hyuA [H]
Identifier: 21228698
GI number: 21228698
Start: 3091624
End: 3093621
Strand: Reverse
Name: hyuA [H]
Synonym: MM_2596
Alternate gene names: 21228698
Gene position: 3093621-3091624 (Counterclockwise)
Preceding gene: 21228699
Following gene: 21228697
Centisome position: 75.52
GC content: 47.95
Gene sequence:
>1998_bases ATGGCATACAGTCTTGGCATTGACGCAGGCGGGACCTATACTGATTCTATATTAATCCGTAATTCGGATGGAGAGGTTAT TGGTTCTAACAAGTCACTCACGACATATCCAGACCTTCTGGAAGGAATAATGAAATCAATTGACGGGCTTAACCAGGAAA AACTGAAACTTGTGACCCTGGTTTCGGTTTCCACAACTCTTGCAACCAATACTATCCTTGAAAAAACAGGATATCCCGTG GGACTGATCCTTGTAGGCAACTACGAAATCCCTGAGGACTCGGAGATTGAAAATTGCATAATGGTGCAGGGTGGGCACGA TAGCCGCGGAGATGAAGTGGCACCCCTTGACCTTTCCGCAGTTGAGAGCTTTGTTCTGGGGCTGAAGGGCAGGGTCTCGG CATTTGCAGTTTCTTCATACTTCAGTGTCCGCAACCCTGAACATGAACTGCAGATAAAAGCCCTGATTCAGGAACTTACA GGACTTCCTGTAGTCTGCGGGCATGAACTTGCTCAGGCACTGGGAGCATATGAAAGAGGGGTTACGGCTTACCTTAACGC CCAGCTTCTTCCGGTAGCAGAGGGTTTTCTGAAAACCGTTGTCTGTGAGATAGAGAGAAGAGGGCTTGAGCCCAGAATTG CGATGCTCCGCTGCGACGGGTCTGTTGTCAGCATGCACGAAGCGATGAGAAAGCCCATAGAATCGGTCTTTTCCGGGCCT GCCGCAAGCCTGCTCGGGGCTTCATATCTGTCAGGATACGAGACCTGTGCAGTTATCGATGTAGGAGGGACAAGTACGGA TGTGTCCCTGATCCACAGAGGGCTTCCTTACCTCAGTGAAACCGGGGCAGTTGTGGGAGGCTGGCAGACAAAGGTAAGGG CACTCAGGATGGAGACTTCGGCAATGGGAGGAGACAGCCATATCTGGGTCCAGGCCAGTAAAACAAACATCGGACCGCGC AGGGTTATTCCTCTCTGCAGGGCTGCCGTACTTTACCCTTCATTTCTGAGTTCTCTGAAAAAACGCTGGATTCCCGACAA GCTCAAATTAAATGAACATATTCAGGCAACAAAGTTTTTTGTAAGAACAAAGCAGGAGCCTGTTAACCTGACAAGGGAAG AAAAGGAGCTCCTTGCCCTCATAAAAAATGAGCCTCTTTCTCTCAAAGACATTTACTGGGACAGAAACATCCTGCCTTCT AAAAAAGTGATGGACTCTCTTATCCAGAAAAGGCTTGTTCAGGCTATTGGCTTTACCCCAACAGACGCCCTTCATGTGCT GGGAGAATATACCGAATGGAACTCCGAAGCCTCGGAAATAGGGGCTACACTGCTTGCAAACTTTTTAGGGACTGAAAAGC AGGAATTCTGCTTAAATGTAAAGCGGCTTTTCGCCCGGAATATGGCAAAAGATCTCGTTTCCTTCCTCATGGAAGGGGTT GACAGGAACGAAATTGAAAAAATGCTCGAATGCAGCTTATTCTCCCGCTTTAAGGTAGATATCCCGGTTGTACTTCTTGG AGGACCGGTCAGGGCTTATATCGATGACCTGAAAAAAGTGATCGATGCCGAAATAATTGTCCCGGAATACTGTAAAGTAG GAAATGCCGTGGGAGCCCTTGTGGGAAAAGGGACGAAACGTGTGGAAATCACAGTCCGTACAACTTACAGCGAGTCAAGG TACGACATGAGGACAAAAGGGGTTTTTGTCTACACCCCTCTCGGAAGAAGACATTTCGTCCTGAGGAGCGAAGCCCTAGA GTTTGCTGAGGAATTCGGAAGAAAGCTTGTCCTTGATTATATGGCTGAATCCGGGCTTTCTCCGGACCAGGTGACGGTCA GTATGGAAAAGAAAGACATAATGGTCCAGACAGGGGACGTTCCCCTCGAAACCAGGTTTATCTTCGAAGGAATCTCAAAC TCGGACGTATATGAAAAAGCAGTATCAGGGCATAAAGACCTTTGCATAAATCCTGATGGAATTGAAGAACTGACCTGA
Upstream 100 bases:
>100_bases TACTCATAGGTTGCCAGTTATTTAACATGACAAAAATGGAACCCCATATGGCAATTATGAGTACCCTGAATACATAAAAA CAAAATAAGGAAGCAAAAAA
Downstream 100 bases:
>100_bases CACGGAAAATGGAATTTTCCATGTGGGCCCCGGGTTTAAATTGATGGTGAAAAAGGGTAAAGTTCATAACTCTCAGGTAC ATTTGGAACATGAAATATTC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 665; Mature: 664
Protein sequence:
>665_residues MAYSLGIDAGGTYTDSILIRNSDGEVIGSNKSLTTYPDLLEGIMKSIDGLNQEKLKLVTLVSVSTTLATNTILEKTGYPV GLILVGNYEIPEDSEIENCIMVQGGHDSRGDEVAPLDLSAVESFVLGLKGRVSAFAVSSYFSVRNPEHELQIKALIQELT GLPVVCGHELAQALGAYERGVTAYLNAQLLPVAEGFLKTVVCEIERRGLEPRIAMLRCDGSVVSMHEAMRKPIESVFSGP AASLLGASYLSGYETCAVIDVGGTSTDVSLIHRGLPYLSETGAVVGGWQTKVRALRMETSAMGGDSHIWVQASKTNIGPR RVIPLCRAAVLYPSFLSSLKKRWIPDKLKLNEHIQATKFFVRTKQEPVNLTREEKELLALIKNEPLSLKDIYWDRNILPS KKVMDSLIQKRLVQAIGFTPTDALHVLGEYTEWNSEASEIGATLLANFLGTEKQEFCLNVKRLFARNMAKDLVSFLMEGV DRNEIEKMLECSLFSRFKVDIPVVLLGGPVRAYIDDLKKVIDAEIIVPEYCKVGNAVGALVGKGTKRVEITVRTTYSESR YDMRTKGVFVYTPLGRRHFVLRSEALEFAEEFGRKLVLDYMAESGLSPDQVTVSMEKKDIMVQTGDVPLETRFIFEGISN SDVYEKAVSGHKDLCINPDGIEELT
Sequences:
>Translated_665_residues MAYSLGIDAGGTYTDSILIRNSDGEVIGSNKSLTTYPDLLEGIMKSIDGLNQEKLKLVTLVSVSTTLATNTILEKTGYPV GLILVGNYEIPEDSEIENCIMVQGGHDSRGDEVAPLDLSAVESFVLGLKGRVSAFAVSSYFSVRNPEHELQIKALIQELT GLPVVCGHELAQALGAYERGVTAYLNAQLLPVAEGFLKTVVCEIERRGLEPRIAMLRCDGSVVSMHEAMRKPIESVFSGP AASLLGASYLSGYETCAVIDVGGTSTDVSLIHRGLPYLSETGAVVGGWQTKVRALRMETSAMGGDSHIWVQASKTNIGPR RVIPLCRAAVLYPSFLSSLKKRWIPDKLKLNEHIQATKFFVRTKQEPVNLTREEKELLALIKNEPLSLKDIYWDRNILPS KKVMDSLIQKRLVQAIGFTPTDALHVLGEYTEWNSEASEIGATLLANFLGTEKQEFCLNVKRLFARNMAKDLVSFLMEGV DRNEIEKMLECSLFSRFKVDIPVVLLGGPVRAYIDDLKKVIDAEIIVPEYCKVGNAVGALVGKGTKRVEITVRTTYSESR YDMRTKGVFVYTPLGRRHFVLRSEALEFAEEFGRKLVLDYMAESGLSPDQVTVSMEKKDIMVQTGDVPLETRFIFEGISN SDVYEKAVSGHKDLCINPDGIEELT >Mature_664_residues AYSLGIDAGGTYTDSILIRNSDGEVIGSNKSLTTYPDLLEGIMKSIDGLNQEKLKLVTLVSVSTTLATNTILEKTGYPVG LILVGNYEIPEDSEIENCIMVQGGHDSRGDEVAPLDLSAVESFVLGLKGRVSAFAVSSYFSVRNPEHELQIKALIQELTG LPVVCGHELAQALGAYERGVTAYLNAQLLPVAEGFLKTVVCEIERRGLEPRIAMLRCDGSVVSMHEAMRKPIESVFSGPA ASLLGASYLSGYETCAVIDVGGTSTDVSLIHRGLPYLSETGAVVGGWQTKVRALRMETSAMGGDSHIWVQASKTNIGPRR VIPLCRAAVLYPSFLSSLKKRWIPDKLKLNEHIQATKFFVRTKQEPVNLTREEKELLALIKNEPLSLKDIYWDRNILPSK KVMDSLIQKRLVQAIGFTPTDALHVLGEYTEWNSEASEIGATLLANFLGTEKQEFCLNVKRLFARNMAKDLVSFLMEGVD RNEIEKMLECSLFSRFKVDIPVVLLGGPVRAYIDDLKKVIDAEIIVPEYCKVGNAVGALVGKGTKRVEITVRTTYSESRY DMRTKGVFVYTPLGRRHFVLRSEALEFAEEFGRKLVLDYMAESGLSPDQVTVSMEKKDIMVQTGDVPLETRFIFEGISNS DVYEKAVSGHKDLCINPDGIEELT
Specific function: HyuA and hyuB convert D- and L-substituted hydantoins to corresponding N-carbamyl-amino acids [H]
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Drosophila melanogaster, GI45550492, Length=373, Percent_Identity=26.2734584450402, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: NA
Molecular weight: Translated: 73325; Mature: 73194
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSLGIDAGGTYTDSILIRNSDGEVIGSNKSLTTYPDLLEGIMKSIDGLNQEKLKLVTL CEEEEECCCCCCEECEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE VSVSTTLATNTILEKTGYPVGLILVGNYEIPEDSEIENCIMVQGGHDSRGDEVAPLDLSA EEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHH VESFVLGLKGRVSAFAVSSYFSVRNPEHELQIKALIQELTGLPVVCGHELAQALGAYERG HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCC VTAYLNAQLLPVAEGFLKTVVCEIERRGLEPRIAMLRCDGSVVSMHEAMRKPIESVFSGP CEEEECCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCC AASLLGASYLSGYETCAVIDVGGTSTDVSLIHRGLPYLSETGAVVGGWQTKVRALRMETS HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCHHHCCCEEECHHHHHHHHHHHHH AMGGDSHIWVQASKTNIGPRRVIPLCRAAVLYPSFLSSLKKRWIPDKLKLNEHIQATKFF CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHH VRTKQEPVNLTREEKELLALIKNEPLSLKDIYWDRNILPSKKVMDSLIQKRLVQAIGFTP HHCCCCCCCCCHHHHHHHHHHCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCC TDALHVLGEYTEWNSEASEIGATLLANFLGTEKQEFCLNVKRLFARNMAKDLVSFLMEGV CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC DRNEIEKMLECSLFSRFKVDIPVVLLGGPVRAYIDDLKKVIDAEIIVPEYCKVGNAVGAL CHHHHHHHHHHHHHHHEECCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHH VGKGTKRVEITVRTTYSESRYDMRTKGVFVYTPLGRRHFVLRSEALEFAEEFGRKLVLDY HCCCCEEEEEEEEEECCCCCCCCEECCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHH MAESGLSPDQVTVSMEKKDIMVQTGDVPLETRFIFEGISNSDVYEKAVSGHKDLCINPDG HHHCCCCCCCEEEEEECCEEEEEECCCCEEEHHEECCCCCCHHHHHHHCCCCCEEECCCC IEELT HHHCC >Mature Secondary Structure AYSLGIDAGGTYTDSILIRNSDGEVIGSNKSLTTYPDLLEGIMKSIDGLNQEKLKLVTL EEEEECCCCCCEECEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE VSVSTTLATNTILEKTGYPVGLILVGNYEIPEDSEIENCIMVQGGHDSRGDEVAPLDLSA EEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHH VESFVLGLKGRVSAFAVSSYFSVRNPEHELQIKALIQELTGLPVVCGHELAQALGAYERG HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCC VTAYLNAQLLPVAEGFLKTVVCEIERRGLEPRIAMLRCDGSVVSMHEAMRKPIESVFSGP CEEEECCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCC AASLLGASYLSGYETCAVIDVGGTSTDVSLIHRGLPYLSETGAVVGGWQTKVRALRMETS HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCHHHCCCEEECHHHHHHHHHHHHH AMGGDSHIWVQASKTNIGPRRVIPLCRAAVLYPSFLSSLKKRWIPDKLKLNEHIQATKFF CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHH VRTKQEPVNLTREEKELLALIKNEPLSLKDIYWDRNILPSKKVMDSLIQKRLVQAIGFTP HHCCCCCCCCCHHHHHHHHHHCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCC TDALHVLGEYTEWNSEASEIGATLLANFLGTEKQEFCLNVKRLFARNMAKDLVSFLMEGV CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC DRNEIEKMLECSLFSRFKVDIPVVLLGGPVRAYIDDLKKVIDAEIIVPEYCKVGNAVGAL CHHHHHHHHHHHHHHHEECCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHH VGKGTKRVEITVRTTYSESRYDMRTKGVFVYTPLGRRHFVLRSEALEFAEEFGRKLVLDY HCCCCEEEEEEEEEECCCCCCCCEECCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHH MAESGLSPDQVTVSMEKKDIMVQTGDVPLETRFIFEGISNSDVYEKAVSGHKDLCINPDG HHHCCCCCCCEEEEEECCEEEEEECCCCEEEHHEECCCCCCHHHHHHHCCCCCEEECCCC IEELT HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]