Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228666

Identifier: 21228666

GI number: 21228666

Start: 3053126

End: 3053488

Strand: Reverse

Name: 21228666

Synonym: MM_2564

Alternate gene names: NA

Gene position: 3053488-3053126 (Counterclockwise)

Preceding gene: 21228675

Following gene: 21228657

Centisome position: 74.54

GC content: 39.94

Gene sequence:

>363_bases
GTGAAACCGAAAATCAATTCCACAAGTTTTGGTTCGATAACTGTCAGGGGAAAAACCTTTAATTATGATATCCTTATCCG
ATTGGACGGGAAGGTCGAAAAACGCAGGAAAAAGCTTTCAAAAAAACTGTACGGAACATCCCATAAGATCTCGCTTGAAG
AAGCGAAATACATCCATGAAAAAGGAGCAGAGAAGCTCATTATGGGGACTGGGCAGACCGGCTACGTAGAGCTTTCGAAA
AAAGCAGAGAAATATTTCAGGAAAAAAGACTGCAAGGTTAAACTCCTTCCGACCCCTGAAGCAATAAAAATCTGGAACAA
AAGCAAAGGAAAAAACATTGCAATGTTTCATGTTACCTGTTGA

Upstream 100 bases:

>100_bases
ATTCATTTGTTTCCTGCAGGGTAATAAGCCTGTGGTCTCATAAAGAGTGCTGTCAGAGTGCTGTATGCAAAATGAAATTT
CGTTTTGAGGAGGGGAAAAT

Downstream 100 bases:

>100_bases
GCTGTATATCTTAAAAAGGGTCAATTAAAAAGGGTCAAAAAAACACAAAAATTAAAAAAGAGAAGAAATTAAAAAAGAGA
AGAAATTAAAAAAGAGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKPKINSTSFGSITVRGKTFNYDILIRLDGKVEKRRKKLSKKLYGTSHKISLEEAKYIHEKGAEKLIMGTGQTGYVELSK
KAEKYFRKKDCKVKLLPTPEAIKIWNKSKGKNIAMFHVTC

Sequences:

>Translated_120_residues
MKPKINSTSFGSITVRGKTFNYDILIRLDGKVEKRRKKLSKKLYGTSHKISLEEAKYIHEKGAEKLIMGTGQTGYVELSK
KAEKYFRKKDCKVKLLPTPEAIKIWNKSKGKNIAMFHVTC
>Mature_120_residues
MKPKINSTSFGSITVRGKTFNYDILIRLDGKVEKRRKKLSKKLYGTSHKISLEEAKYIHEKGAEKLIMGTGQTGYVELSK
KAEKYFRKKDCKVKLLPTPEAIKIWNKSKGKNIAMFHVTC

Specific function: Unknown

COG id: COG1504

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13751; Mature: 13751

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKINSTSFGSITVRGKTFNYDILIRLDGKVEKRRKKLSKKLYGTSHKISLEEAKYIHE
CCCCCCCCCCCEEEEECCEECEEEEEEECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
KGAEKLIMGTGQTGYVELSKKAEKYFRKKDCKVKLLPTPEAIKIWNKSKGKNIAMFHVTC
CCCCEEEEECCCCCEEEEHHHHHHHHHCCCCEEEEECCCHHEEEECCCCCCEEEEEEEEC
>Mature Secondary Structure
MKPKINSTSFGSITVRGKTFNYDILIRLDGKVEKRRKKLSKKLYGTSHKISLEEAKYIHE
CCCCCCCCCCCEEEEECCEECEEEEEEECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
KGAEKLIMGTGQTGYVELSKKAEKYFRKKDCKVKLLPTPEAIKIWNKSKGKNIAMFHVTC
CCCCEEEEECCCCCEEEEHHHHHHHHHCCCCEEEEECCCHHEEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA