| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228652
Identifier: 21228652
GI number: 21228652
Start: 3035254
End: 3035493
Strand: Reverse
Name: 21228652
Synonym: MM_2550
Alternate gene names: NA
Gene position: 3035493-3035254 (Counterclockwise)
Preceding gene: 21228654
Following gene: 21228651
Centisome position: 74.1
GC content: 32.5
Gene sequence:
>240_bases ATGGTTCAAGCGATAATAAACATTGATGAGCGCACTAATCGAATTTTGAATATTATCAAGGCCAAATACGGTTTAAAAGA TAAAAGTGCCGCTATTAATAAAATGGCTGAAGAGTATGAAGAAGAGATTTTAGAGCCAGAGTTAAAACCTGAGTACATTG AAAAATTAAAGAAAATAGAAAAACAGGAAGCTATAGAAGTAGGCACTGTTGAAAATTTAAGGAAACGATATGGCCTTTGA
Upstream 100 bases:
>100_bases ATAGAGGTCAGGACTCAAAAAGCCAGTGGAAATCAAATCCTGGCAGGGCAGAACGATATATATTAATATGGTATTAATCT TCTATTAATATTGGATATAC
Downstream 100 bases:
>100_bases TTTTATGTATTTCTTAAAAATCAGATCGGAACTTGATAGTAAATTTGAAAAACTAGCAAAAAAGAATAAAAAACAACTTG AAATTATTTTAGCTAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MVQAIINIDERTNRILNIIKAKYGLKDKSAAINKMAEEYEEEILEPELKPEYIEKLKKIEKQEAIEVGTVENLRKRYGL
Sequences:
>Translated_79_residues MVQAIINIDERTNRILNIIKAKYGLKDKSAAINKMAEEYEEEILEPELKPEYIEKLKKIEKQEAIEVGTVENLRKRYGL >Mature_79_residues MVQAIINIDERTNRILNIIKAKYGLKDKSAAINKMAEEYEEEILEPELKPEYIEKLKKIEKQEAIEVGTVENLRKRYGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020271 - ProDom: PD060824 [H]
Pfam domain/function: PF10884 DUF2683 [H]
EC number: NA
Molecular weight: Translated: 9248; Mature: 9248
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQAIINIDERTNRILNIIKAKYGLKDKSAAINKMAEEYEEEILEPELKPEYIEKLKKIE CCHHEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KQEAIEVGTVENLRKRYGL HHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MVQAIINIDERTNRILNIIKAKYGLKDKSAAINKMAEEYEEEILEPELKPEYIEKLKKIE CCHHEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KQEAIEVGTVENLRKRYGL HHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]