Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228649

Identifier: 21228649

GI number: 21228649

Start: 3033143

End: 3033943

Strand: Reverse

Name: 21228649

Synonym: MM_2547

Alternate gene names: NA

Gene position: 3033943-3033143 (Counterclockwise)

Preceding gene: 21228651

Following gene: 21228648

Centisome position: 74.06

GC content: 43.82

Gene sequence:

>801_bases
ATGAAACTGGAATCTGTAAAATTAGCTTATTTTTCACCTACCGGAACAACAAAAGCGGTTGTTCAGGGAATTGCACATGG
CATTAATCCAAGCACCGTAGAATTAATTGATATTACCCGACCGGCTGCAAGAAAACAACCCTTGCAGACATCGGAAAATG
AATTACTTATAGTTGGAGTTCCCGTATATATGGGGAGAGTGCCGGCATTACTAAATGAATGGCTGAACGCAATTCAGGCT
CATAATACGCCAACGGTCTGTGTTGTTGTCTATGGTAACCGCGTGTATGACGATGCACTGCTCGAACTAAAAAATATTGT
AACTAAATGTGGGTGTATACCCATTGCCTGTGCAGCATATATCGGGGAACACTCATTCTCAAATTCCGAGACACCAACAG
CACAGGGACGCCCAGATAAAGATGACTTAAACCACGCAGAAGCATTCGGACAGAAAATACATGAAAAACTGCAATCCATT
TCATCAACCTCTCAGGATTCTGATGTGCAGGTGCCTGGAACTTATCCTTATGGTGGGGTTACAGAATTGTGGACTGTTGA
TTTTATCGCAGTCAGTGATGATTGTTCGCAGTGCGGAACCTGTGCAGAGGTGTGCCCAGTTGGTGCTATCGATCCAGAAA
ATAGTAATTTGACTGATACAGGAAAATGCATTACCTGCTGTGCGTGTATCAAGAACTGTCCTCAAAACGCCAGGTCGATG
AAACCCGGGCTGGTCAAGGACGCATCTGTGCGCCTTCATACACTCTATAGTCAGCGAAAAGAGCCTGAATTTTTTATCTA
A

Upstream 100 bases:

>100_bases
ATACTTTTAGCTAACTCACAGTTATTCACTAACCAATAGTTATTTAATCACCCATAGTTATATTATATCCCGGAGTTACA
CAATAGATGGAGTAAATAAA

Downstream 100 bases:

>100_bases
TGAATATATCCCGGATATACGGGTTAAATGGAGTGGAATTATGGGAATAGCCGATAGAAGGCAACGGGAAAAGGAACAGA
GAAGGACCGAGATTATCGAT

Product: putative ferredoxin

Products: NA

Alternate protein names: 4Fe-4S Ferredoxin; Flavodoxin; Flavodoxin/Nitric Oxide Synthase; Iron-Sulfur Proteins

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKLESVKLAYFSPTGTTKAVVQGIAHGINPSTVELIDITRPAARKQPLQTSENELLIVGVPVYMGRVPALLNEWLNAIQA
HNTPTVCVVVYGNRVYDDALLELKNIVTKCGCIPIACAAYIGEHSFSNSETPTAQGRPDKDDLNHAEAFGQKIHEKLQSI
SSTSQDSDVQVPGTYPYGGVTELWTVDFIAVSDDCSQCGTCAEVCPVGAIDPENSNLTDTGKCITCCACIKNCPQNARSM
KPGLVKDASVRLHTLYSQRKEPEFFI

Sequences:

>Translated_266_residues
MKLESVKLAYFSPTGTTKAVVQGIAHGINPSTVELIDITRPAARKQPLQTSENELLIVGVPVYMGRVPALLNEWLNAIQA
HNTPTVCVVVYGNRVYDDALLELKNIVTKCGCIPIACAAYIGEHSFSNSETPTAQGRPDKDDLNHAEAFGQKIHEKLQSI
SSTSQDSDVQVPGTYPYGGVTELWTVDFIAVSDDCSQCGTCAEVCPVGAIDPENSNLTDTGKCITCCACIKNCPQNARSM
KPGLVKDASVRLHTLYSQRKEPEFFI
>Mature_266_residues
MKLESVKLAYFSPTGTTKAVVQGIAHGINPSTVELIDITRPAARKQPLQTSENELLIVGVPVYMGRVPALLNEWLNAIQA
HNTPTVCVVVYGNRVYDDALLELKNIVTKCGCIPIACAAYIGEHSFSNSETPTAQGRPDKDDLNHAEAFGQKIHEKLQSI
SSTSQDSDVQVPGTYPYGGVTELWTVDFIAVSDDCSQCGTCAEVCPVGAIDPENSNLTDTGKCITCCACIKNCPQNARSM
KPGLVKDASVRLHTLYSQRKEPEFFI

Specific function: Unknown

COG id: COG2221

COG function: function code C; Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28806; Mature: 28806

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLESVKLAYFSPTGTTKAVVQGIAHGINPSTVELIDITRPAARKQPLQTSENELLIVGV
CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCCCCCCCCEEEEEC
PVYMGRVPALLNEWLNAIQAHNTPTVCVVVYGNRVYDDALLELKNIVTKCGCIPIACAAY
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHH
IGEHSFSNSETPTAQGRPDKDDLNHAEAFGQKIHEKLQSISSTSQDSDVQVPGTYPYGGV
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCC
TELWTVDFIAVSDDCSQCGTCAEVCPVGAIDPENSNLTDTGKCITCCACIKNCPQNARSM
CHHEEEEEEEECCCHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHC
KPGLVKDASVRLHTLYSQRKEPEFFI
CCCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKLESVKLAYFSPTGTTKAVVQGIAHGINPSTVELIDITRPAARKQPLQTSENELLIVGV
CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCCCCCCCCEEEEEC
PVYMGRVPALLNEWLNAIQAHNTPTVCVVVYGNRVYDDALLELKNIVTKCGCIPIACAAY
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHH
IGEHSFSNSETPTAQGRPDKDDLNHAEAFGQKIHEKLQSISSTSQDSDVQVPGTYPYGGV
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCC
TELWTVDFIAVSDDCSQCGTCAEVCPVGAIDPENSNLTDTGKCITCCACIKNCPQNARSM
CHHEEEEEEEECCCHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHC
KPGLVKDASVRLHTLYSQRKEPEFFI
CCCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA