Click here to switch to the map view.

The map label for this gene is 21228573

Identifier: 21228573

GI number: 21228573

Start: 2949934

End: 2951238

Strand: Reverse

Name: 21228573

Synonym: MM_2471

Alternate gene names: NA

Gene position: 2951238-2949934 (Counterclockwise)

Preceding gene: 21228576

Following gene: 21228572

Centisome position: 72.05

GC content: 43.68

Gene sequence:

>1305_bases
TTGCTTCTTGTTTCTACAGGCGCTGCGGGTGCAGAAGTCATTTACGTTGAGCCCGGAGCTTCAATTCAGGCTGCAGTAAA
TAACTCTACAACCGGGGACTTTATTATTGTGAAAGCCGGAGAATACGAAGAAAATATTGTTGTCAATGTTTCAGGGGTAA
CGGTCAGTTCGGAGCCTGAAAAATCTGGTAGCGTTTTTATCAGAGCAGGGGACAGGAATTCCAGCGTTTTTCAGGTTAAG
GCCGACAACGTAACTATCAGCGGCTTTAACATAACAGGGTCAGGAGAGTTTTTCAGCACACATGAGGCTTCCAGCCCCAG
AGACTCTTTCCCCAAAGACCCGGATGGACAGGGTGTGTCCGATATACCGGAACTTAGAAAAACTTACAGTCTCGGTTCAG
GGGAAGTTTTTATCTCCAGATCAACTGAATTTGACTGCCCTCAGGCAGGGATCTGTCTTGATCAGGTTGAAAACTGCACA
ATCGAAAGAAATCATATTTTTGAAAACCAGTACGGAGTTTACCTTCAGGGCTCCATGAACAATACCCTCTCGAACAATAC
CTTTTTCAGAAACGGCATCCTGATTGATGAAGGCTGCAGCAGGAATACGGCAGAAAACAACTCCATTGAAGAGGGAAATT
TAATTATCGGAGCACACTGCTGGGACAATATTATATCCCGTAATCGGCTTTCAAACGGAGGAGGAATAGGGATCGCATGC
TGCGGAGGAGGAAACCTTGTTTCGAATAATGAGATAATTAATTGCAGTACAGGGGTTGATATGTATGACACACAGGCAAG
AACCGTCCTCTGTGGAAACCTGATTACGGACTGCGATTATGGTATTTACCTGATCCTTGTCTATGACTCCAGGGTATACA
ATAACACAATTTCAAACAGCAGCAGGGGCATTTTTTTGAGAGAAAACAGCCAGAATAATGAACTGTCCGGCAACATAATA
AACTCCAGCAATGAATCCGGGATCTATTTACTGGACCATTGTGCTGACAACCGTATCTTTAACAACTACTTTAATAATAC
TGTAAATGTGAAAGCTGAAAACAGCAAAGGAAACAGCTGGAACATTACAAAAGCTCCCGGAATAAATATCGCGGAAGGAC
CGTACCTTGGAGGCAATTTCTGGGCTGACCTTAACGGAACAGGATATTCTCAAATTGCTGAAGATTCGGACTCTGATGGC
ATCTGTGACCTTCCTTACAATGTTAACGGATGTGATTATGACTATCTGCCACTTGCCAGACTTCCTTTTTCACCTTCTTT
ATCCGGAGGAAACCTGAAGTTATGA

Upstream 100 bases:

>100_bases
AATCGATCGGCTGGAAATTATCTGGGGAGGGGCACTTATGAAAAGTATACTTATCGGAGACTGTATCAGAAAACTAACCA
GCTCTTTACTGGTCGTTGCT

Downstream 100 bases:

>100_bases
TGAGTATTTAAAAGTCACTCGCAATATTCCGACAAATTATTCGGGAAGCGGTATGAAAAAGAGAATTCCTATTCTACAGG
CTGAAAAAGCCTGAAGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Surface Layer Protein B; Cell Surface Glycoprotein; Cell Surfacr Protein; PKD Domain Containing Protein; TPR Repeat-Containing Protein; Surface Layer Protein

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MLLVSTGAAGAEVIYVEPGASIQAAVNNSTTGDFIIVKAGEYEENIVVNVSGVTVSSEPEKSGSVFIRAGDRNSSVFQVK
ADNVTISGFNITGSGEFFSTHEASSPRDSFPKDPDGQGVSDIPELRKTYSLGSGEVFISRSTEFDCPQAGICLDQVENCT
IERNHIFENQYGVYLQGSMNNTLSNNTFFRNGILIDEGCSRNTAENNSIEEGNLIIGAHCWDNIISRNRLSNGGGIGIAC
CGGGNLVSNNEIINCSTGVDMYDTQARTVLCGNLITDCDYGIYLILVYDSRVYNNTISNSSRGIFLRENSQNNELSGNII
NSSNESGIYLLDHCADNRIFNNYFNNTVNVKAENSKGNSWNITKAPGINIAEGPYLGGNFWADLNGTGYSQIAEDSDSDG
ICDLPYNVNGCDYDYLPLARLPFSPSLSGGNLKL

Sequences:

>Translated_434_residues
MLLVSTGAAGAEVIYVEPGASIQAAVNNSTTGDFIIVKAGEYEENIVVNVSGVTVSSEPEKSGSVFIRAGDRNSSVFQVK
ADNVTISGFNITGSGEFFSTHEASSPRDSFPKDPDGQGVSDIPELRKTYSLGSGEVFISRSTEFDCPQAGICLDQVENCT
IERNHIFENQYGVYLQGSMNNTLSNNTFFRNGILIDEGCSRNTAENNSIEEGNLIIGAHCWDNIISRNRLSNGGGIGIAC
CGGGNLVSNNEIINCSTGVDMYDTQARTVLCGNLITDCDYGIYLILVYDSRVYNNTISNSSRGIFLRENSQNNELSGNII
NSSNESGIYLLDHCADNRIFNNYFNNTVNVKAENSKGNSWNITKAPGINIAEGPYLGGNFWADLNGTGYSQIAEDSDSDG
ICDLPYNVNGCDYDYLPLARLPFSPSLSGGNLKL
>Mature_434_residues
MLLVSTGAAGAEVIYVEPGASIQAAVNNSTTGDFIIVKAGEYEENIVVNVSGVTVSSEPEKSGSVFIRAGDRNSSVFQVK
ADNVTISGFNITGSGEFFSTHEASSPRDSFPKDPDGQGVSDIPELRKTYSLGSGEVFISRSTEFDCPQAGICLDQVENCT
IERNHIFENQYGVYLQGSMNNTLSNNTFFRNGILIDEGCSRNTAENNSIEEGNLIIGAHCWDNIISRNRLSNGGGIGIAC
CGGGNLVSNNEIINCSTGVDMYDTQARTVLCGNLITDCDYGIYLILVYDSRVYNNTISNSSRGIFLRENSQNNELSGNII
NSSNESGIYLLDHCADNRIFNNYFNNTVNVKAENSKGNSWNITKAPGINIAEGPYLGGNFWADLNGTGYSQIAEDSDSDG
ICDLPYNVNGCDYDYLPLARLPFSPSLSGGNLKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46749; Mature: 46749

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS00888 CNMP_BINDING_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVSTGAAGAEVIYVEPGASIQAAVNNSTTGDFIIVKAGEYEENIVVNVSGVTVSSEPE
CEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEECEEECCCCC
KSGSVFIRAGDRNSSVFQVKADNVTISGFNITGSGEFFSTHEASSPRDSFPKDPDGQGVS
CCCCEEEEECCCCCCEEEEEECCEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCH
DIPELRKTYSLGSGEVFISRSTEFDCPQAGICLDQVENCTIERNHIFENQYGVYLQGSMN
HHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEHHHHCCCEEECCEEECCCCCEEEECCCC
NTLSNNTFFRNGILIDEGCSRNTAENNSIEEGNLIIGAHCWDNIISRNRLSNGGGIGIAC
CCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCEEEEE
CGGGNLVSNNEIINCSTGVDMYDTQARTVLCGNLITDCDYGIYLILVYDSRVYNNTISNS
ECCCCEECCCCEEEEECCCCEECCCCEEEEECCHHCCCCCCEEEEEEECCEEECCCCCCC
SRGIFLRENSQNNELSGNIINSSNESGIYLLDHCADNRIFNNYFNNTVNVKAENSKGNSW
CCEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCEEHHHCCCEEEEEEECCCCCEE
NITKAPGINIAEGPYLGGNFWADLNGTGYSQIAEDSDSDGICDLPYNVNGCDYDYLPLAR
EEEECCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCC
LPFSPSLSGGNLKL
CCCCCCCCCCCCCC
>Mature Secondary Structure
MLLVSTGAAGAEVIYVEPGASIQAAVNNSTTGDFIIVKAGEYEENIVVNVSGVTVSSEPE
CEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEECEEECCCCC
KSGSVFIRAGDRNSSVFQVKADNVTISGFNITGSGEFFSTHEASSPRDSFPKDPDGQGVS
CCCCEEEEECCCCCCEEEEEECCEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCH
DIPELRKTYSLGSGEVFISRSTEFDCPQAGICLDQVENCTIERNHIFENQYGVYLQGSMN
HHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEHHHHCCCEEECCEEECCCCCEEEECCCC
NTLSNNTFFRNGILIDEGCSRNTAENNSIEEGNLIIGAHCWDNIISRNRLSNGGGIGIAC
CCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCEEEEE
CGGGNLVSNNEIINCSTGVDMYDTQARTVLCGNLITDCDYGIYLILVYDSRVYNNTISNS
ECCCCEECCCCEEEEECCCCEECCCCEEEEECCHHCCCCCCEEEEEEECCEEECCCCCCC
SRGIFLRENSQNNELSGNIINSSNESGIYLLDHCADNRIFNNYFNNTVNVKAENSKGNSW
CCEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCEEHHHCCCEEEEEEECCCCCEE
NITKAPGINIAEGPYLGGNFWADLNGTGYSQIAEDSDSDGICDLPYNVNGCDYDYLPLAR
EEEECCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCCC
LPFSPSLSGGNLKL
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA