| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228524
Identifier: 21228524
GI number: 21228524
Start: 2889708
End: 2890766
Strand: Reverse
Name: 21228524
Synonym: MM_2422
Alternate gene names: NA
Gene position: 2890766-2889708 (Counterclockwise)
Preceding gene: 21228526
Following gene: 21228517
Centisome position: 70.57
GC content: 47.4
Gene sequence:
>1059_bases ATGGTAAATACACTCTCCCATCTTGGAGTCGGTCTCCTGATCGCTCTTGCTCTCGGATTCAAAGGAAAAAAACGAAATGT TGTGGCATTCCTGTCAATCCTCCCTGACCTCGATTTTATCCCATACACCCTTTTTTTCCTTCTCAGCAGCAGCGTGAGCC ACGAGACAAGAACCCATCTCTTTTACTTCCTGGGCCACAGGGAGTTCATGCATTCCATCCTGTTTATCTTTCTTGTCACG CTTTTCATCTGGCTCAGGACTAAAGACCGCCTGTTCACAGCCGCGGGGTTTGCAGCCATTCTGTCCCACAGCTACCTTGA TTATGCCACAAGCTGGAAAATGCGCCCCCTTTTCCCGTTCAGCACAGAATCATCTATCATGGGAGCAGTCTATTTTTTCG ACCCCATTGCAAACCTACTGCCCCTGCTGCCCATTTTTATTGTGCTTGTGGGATATCAGAAAAACCGGGGCAGATGGAAC GGCAAATTCAACAGGTTCTGTACTTTCGTAACCAATAACCGGCGCAGCCTTTACAGGACGCTTGCAGTTGTGCTTCTGGT CTGGATTACAGTCCTCCCGGTAGCCAAGTTTTTCCTTGTCAACCAGATTTCCGAAGCCGAAGGAACGAGAATAAGCTACC AGGGGACCTACCCGGTTTCACCCGGAAAATTCCTGGCTGCATACGAATATAACGACACACATTTCAAGATTATGGAAATC GGCTACCTTTCAGGCATCGAAAGAAGTGATTTTATCGAAAAAATTAACTCAACCGGCAGCGTCCCCGATGCGTCCACCTA CGCTGAAAGAGCAGGAAAACTTTACAGCACAGCCGTTCCTCAGGAAATCGATTATCCTGTTTTTTCGGTTTCCGAAAATG GAGATAACGGCACGGTTACTGTCCTGCTGAGCGATGCAAGGAATTCTTATGTTGAAAACTGGGCTTATTTCAGGACGGTT TACAGGTTTGTTTTTGATAAGGAAAGCGGGGAATATGAGGCTTATGCGAGTGAACAGACGGGAAGGGAGAGGAGGTTGGA GAGGAATTATTTTGGGTGA
Upstream 100 bases:
>100_bases CAGGAAACGAATTTGCCCGGGAATATAAAAAGTAAAAATAATAGGAAAAAGAAAGTAAAGAGTGAGAATAAAAGCAAAAG AAAACTCGGGATAAAAGTAA
Downstream 100 bases:
>100_bases GATTAAAAAAATAACTTATAGAATATTCCGTTGCTGCGTATTTGTTTAAATGTATTTTTGGTTTTGAGTAATTTTGTCGA ACTTTATAATTCTGTAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MVNTLSHLGVGLLIALALGFKGKKRNVVAFLSILPDLDFIPYTLFFLLSSSVSHETRTHLFYFLGHREFMHSILFIFLVT LFIWLRTKDRLFTAAGFAAILSHSYLDYATSWKMRPLFPFSTESSIMGAVYFFDPIANLLPLLPIFIVLVGYQKNRGRWN GKFNRFCTFVTNNRRSLYRTLAVVLLVWITVLPVAKFFLVNQISEAEGTRISYQGTYPVSPGKFLAAYEYNDTHFKIMEI GYLSGIERSDFIEKINSTGSVPDASTYAERAGKLYSTAVPQEIDYPVFSVSENGDNGTVTVLLSDARNSYVENWAYFRTV YRFVFDKESGEYEAYASEQTGRERRLERNYFG
Sequences:
>Translated_352_residues MVNTLSHLGVGLLIALALGFKGKKRNVVAFLSILPDLDFIPYTLFFLLSSSVSHETRTHLFYFLGHREFMHSILFIFLVT LFIWLRTKDRLFTAAGFAAILSHSYLDYATSWKMRPLFPFSTESSIMGAVYFFDPIANLLPLLPIFIVLVGYQKNRGRWN GKFNRFCTFVTNNRRSLYRTLAVVLLVWITVLPVAKFFLVNQISEAEGTRISYQGTYPVSPGKFLAAYEYNDTHFKIMEI GYLSGIERSDFIEKINSTGSVPDASTYAERAGKLYSTAVPQEIDYPVFSVSENGDNGTVTVLLSDARNSYVENWAYFRTV YRFVFDKESGEYEAYASEQTGRERRLERNYFG >Mature_352_residues MVNTLSHLGVGLLIALALGFKGKKRNVVAFLSILPDLDFIPYTLFFLLSSSVSHETRTHLFYFLGHREFMHSILFIFLVT LFIWLRTKDRLFTAAGFAAILSHSYLDYATSWKMRPLFPFSTESSIMGAVYFFDPIANLLPLLPIFIVLVGYQKNRGRWN GKFNRFCTFVTNNRRSLYRTLAVVLLVWITVLPVAKFFLVNQISEAEGTRISYQGTYPVSPGKFLAAYEYNDTHFKIMEI GYLSGIERSDFIEKINSTGSVPDASTYAERAGKLYSTAVPQEIDYPVFSVSENGDNGTVTVLLSDARNSYVENWAYFRTV YRFVFDKESGEYEAYASEQTGRERRLERNYFG
Specific function: Unknown
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40318; Mature: 40318
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNTLSHLGVGLLIALALGFKGKKRNVVAFLSILPDLDFIPYTLFFLLSSSVSHETRTHL CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHH FYFLGHREFMHSILFIFLVTLFIWLRTKDRLFTAAGFAAILSHSYLDYATSWKMRPLFPF HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC STESSIMGAVYFFDPIANLLPLLPIFIVLVGYQKNRGRWNGKFNRFCTFVTNNRRSLYRT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHH LAVVLLVWITVLPVAKFFLVNQISEAEGTRISYQGTYPVSPGKFLAAYEYNDTHFKIMEI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCEEEEEEE GYLSGIERSDFIEKINSTGSVPDASTYAERAGKLYSTAVPQEIDYPVFSVSENGDNGTVT HHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCCCCEEE VLLSDARNSYVENWAYFRTVYRFVFDKESGEYEAYASEQTGRERRLERNYFG EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHCCHHHHHHHCCCC >Mature Secondary Structure MVNTLSHLGVGLLIALALGFKGKKRNVVAFLSILPDLDFIPYTLFFLLSSSVSHETRTHL CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHH FYFLGHREFMHSILFIFLVTLFIWLRTKDRLFTAAGFAAILSHSYLDYATSWKMRPLFPF HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC STESSIMGAVYFFDPIANLLPLLPIFIVLVGYQKNRGRWNGKFNRFCTFVTNNRRSLYRT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHH LAVVLLVWITVLPVAKFFLVNQISEAEGTRISYQGTYPVSPGKFLAAYEYNDTHFKIMEI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCEEEEEEE GYLSGIERSDFIEKINSTGSVPDASTYAERAGKLYSTAVPQEIDYPVFSVSENGDNGTVT HHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCCCCEEE VLLSDARNSYVENWAYFRTVYRFVFDKESGEYEAYASEQTGRERRLERNYFG EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA