The gene/protein map for NC_011898 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228508

Identifier: 21228508

GI number: 21228508

Start: 2867470

End: 2868168

Strand: Direct

Name: 21228508

Synonym: MM_2406

Alternate gene names: NA

Gene position: 2867470-2868168 (Clockwise)

Preceding gene: 21228490

Following gene: 21228509

Centisome position: 70.0

GC content: 33.91

Gene sequence:

>699_bases
ATGGCGTTAATACCGGCAGTAAATGCACAGGAAGAATTAACAGCAAGTGAAAAACCTTCTGAATGGGAACAAGGTCTAAT
AGATGCTCTCAACTCTAATACAAAAACCTTTTCAACAGACGATTTAATTTTGAATTATTGCGAAGCAAATAAAGACAAAA
TTTCAATACTGAAGAACAATACTGCTTCTGAAAAAAGTAAGTTAAGAACATATGAACTAAAAGATGGATCAGATATAACT
TTCACTAATGAAAATTTCTTTTTCGTTACTAACATGACTGAAGAACCAAATAATAAAACAATAACTCAAAGTACTACTGC
AGCAACAAGTTCTGTCAATCTTGATTATACTGATACGATAACAGCATCACAGAGTTTCTATAATATTATGGGAGGGAGAC
TGTTTACTATCTATTCAAAAGGATATTATGGGTATAGTATATCTCCTGCTATTGTGGAAGCTCATTATATAGATGCATGG
TATACATTAGGTACTCCAACTATATTTCAGGTGAGTAACTGGCAGGAAGGGGCGAGTGATAATACTGTCACTCATATATC
TGAAATTTATGGCAGTGGACATTTCCATTGGGGATTTGAAATCGCTGGTGCTGGTTTAGTTCTCTATGATAAGAATATCA
AAGTTTACTCAACATGTGATCAATTTGGAAATGTCCACCGCACCTATGAAATGACATAA

Upstream 100 bases:

>100_bases
GCCTGATTCTGCCTCCTAAGGGAAAAACAACTTAGGAGTTAGACGAATGAGTAGAAACAAAATTACCATAGGAATACTTT
TTTTGACGATGCTGGTTGGT

Downstream 100 bases:

>100_bases
TGAAATAACTTAAAAATATAGCTATAAGATGTAAAATATCGGATTGTGAAATAGTTATTGAGAATTTTAAGCACAAAGTC
CTCAATAACTATTTCCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MALIPAVNAQEELTASEKPSEWEQGLIDALNSNTKTFSTDDLILNYCEANKDKISILKNNTASEKSKLRTYELKDGSDIT
FTNENFFFVTNMTEEPNNKTITQSTTAATSSVNLDYTDTITASQSFYNIMGGRLFTIYSKGYYGYSISPAIVEAHYIDAW
YTLGTPTIFQVSNWQEGASDNTVTHISEIYGSGHFHWGFEIAGAGLVLYDKNIKVYSTCDQFGNVHRTYEMT

Sequences:

>Translated_232_residues
MALIPAVNAQEELTASEKPSEWEQGLIDALNSNTKTFSTDDLILNYCEANKDKISILKNNTASEKSKLRTYELKDGSDIT
FTNENFFFVTNMTEEPNNKTITQSTTAATSSVNLDYTDTITASQSFYNIMGGRLFTIYSKGYYGYSISPAIVEAHYIDAW
YTLGTPTIFQVSNWQEGASDNTVTHISEIYGSGHFHWGFEIAGAGLVLYDKNIKVYSTCDQFGNVHRTYEMT
>Mature_231_residues
ALIPAVNAQEELTASEKPSEWEQGLIDALNSNTKTFSTDDLILNYCEANKDKISILKNNTASEKSKLRTYELKDGSDITF
TNENFFFVTNMTEEPNNKTITQSTTAATSSVNLDYTDTITASQSFYNIMGGRLFTIYSKGYYGYSISPAIVEAHYIDAWY
TLGTPTIFQVSNWQEGASDNTVTHISEIYGSGHFHWGFEIAGAGLVLYDKNIKVYSTCDQFGNVHRTYEMT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25981; Mature: 25850

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIPAVNAQEELTASEKPSEWEQGLIDALNSNTKTFSTDDLILNYCEANKDKISILKNN
CEECCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCEEECHHHEEEECCCCCCEEEEEECC
TASEKSKLRTYELKDGSDITFTNENFFFVTNMTEEPNNKTITQSTTAATSSVNLDYTDTI
CCCHHHHEEEEEECCCCEEEEECCCEEEEEECCCCCCCCEEEECCCCCCEEECCCCCCCE
TASQSFYNIMGGRLFTIYSKGYYGYSISPAIVEAHYIDAWYTLGTPTIFQVSNWQEGASD
ECCHHHHHHHCCEEEEEEECCCCCEECCHHHEEEEEEEEEEECCCCEEEEECCCCCCCCC
NTVTHISEIYGSGHFHWGFEIAGAGLVLYDKNIKVYSTCDQFGNVHRTYEMT
CHHHHHHHHHCCCCEEEEEEECCCEEEEEECCEEEEEEHHHHCCCCEEEECC
>Mature Secondary Structure 
ALIPAVNAQEELTASEKPSEWEQGLIDALNSNTKTFSTDDLILNYCEANKDKISILKNN
EECCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCEEECHHHEEEECCCCCCEEEEEECC
TASEKSKLRTYELKDGSDITFTNENFFFVTNMTEEPNNKTITQSTTAATSSVNLDYTDTI
CCCHHHHEEEEEECCCCEEEEECCCEEEEEECCCCCCCCEEEECCCCCCEEECCCCCCCE
TASQSFYNIMGGRLFTIYSKGYYGYSISPAIVEAHYIDAWYTLGTPTIFQVSNWQEGASD
ECCHHHHHHHCCEEEEEEECCCCCEECCHHHEEEEEEEEEEECCCCEEEEECCCCCCCCC
NTVTHISEIYGSGHFHWGFEIAGAGLVLYDKNIKVYSTCDQFGNVHRTYEMT
CHHHHHHHHHCCCCEEEEEEECCCEEEEEECCEEEEEEHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA