Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228467

Identifier: 21228467

GI number: 21228467

Start: 2822154

End: 2822513

Strand: Direct

Name: 21228467

Synonym: MM_2365

Alternate gene names: NA

Gene position: 2822154-2822513 (Clockwise)

Preceding gene: 21228466

Following gene: 21228468

Centisome position: 68.89

GC content: 42.22

Gene sequence:

>360_bases
ATGCAGGGAATCCAACTTGACCTTATATCCGAAGCCAAAATTTCTCAGATGGCTTCCATGGAAAAAGTCCGGTATATAAT
CGATGAGGTGAGAAAGGGCAAAATCCTTGTGCTCGAAAAAGGTCTCAACCCTATGGAAGAGGCTAAACTCATTGAAATGA
CAATGTCAGCAATCCAGCCGGATGTATTTTCAGGTATCGAGATGCAGAGCTATCCTGCAAATGCGGACTCTTCTTTGCTG
GGGAAATTTTTCAAAAAACAGAGCAGCAAAAGACTTACGGTTATAGGGCCCGCAAACCAGCTCAAAACCCTTAAAAAAGA
TAGGAATCTAATCAGTGCACTTGTCTCTGCAAGTAAGTAA

Upstream 100 bases:

>100_bases
AAGCCTTCCCTCAGCACCCTATGGTACCTGTCTCAGCGCTTGAAGGAGTGGGTATGGACTCATTCTATGAAGCTCTGAGC
AAACAGTTCGGGTGATCCAG

Downstream 100 bases:

>100_bases
CGAAGTGGAAACAATGTGTGCCCAGAAGACCCAAGACCTGGAAGCAAAATTATCCCCTCCCCAGTCCCTAGGCTCCTTTG
AGATGGGCAGGAACGATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MQGIQLDLISEAKISQMASMEKVRYIIDEVRKGKILVLEKGLNPMEEAKLIEMTMSAIQPDVFSGIEMQSYPANADSSLL
GKFFKKQSSKRLTVIGPANQLKTLKKDRNLISALVSASK

Sequences:

>Translated_119_residues
MQGIQLDLISEAKISQMASMEKVRYIIDEVRKGKILVLEKGLNPMEEAKLIEMTMSAIQPDVFSGIEMQSYPANADSSLL
GKFFKKQSSKRLTVIGPANQLKTLKKDRNLISALVSASK
>Mature_119_residues
MQGIQLDLISEAKISQMASMEKVRYIIDEVRKGKILVLEKGLNPMEEAKLIEMTMSAIQPDVFSGIEMQSYPANADSSLL
GKFFKKQSSKRLTVIGPANQLKTLKKDRNLISALVSASK

Specific function: Unknown

COG id: COG3365

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13202; Mature: 13202

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGIQLDLISEAKISQMASMEKVRYIIDEVRKGKILVLEKGLNPMEEAKLIEMTMSAIQP
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCC
DVFSGIEMQSYPANADSSLLGKFFKKQSSKRLTVIGPANQLKTLKKDRNLISALVSASK
HHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQGIQLDLISEAKISQMASMEKVRYIIDEVRKGKILVLEKGLNPMEEAKLIEMTMSAIQP
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCC
DVFSGIEMQSYPANADSSLLGKFFKKQSSKRLTVIGPANQLKTLKKDRNLISALVSASK
HHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA